A large-scale evaluation of computational protein function prediction. / Radivojac, Predrag; Clark, Wyatt T; Oron, Tal Ronnen; Schnoes, Alexandra M; Wittkop, Tobias; Sokolov, Artem; Graim, Kiley; Funk, Christopher; Verspoor, Karin; Ben-Hur, Asa; Pandey, Gaurav; Yunes, Jeffrey M; Talwalkar, Ameet S; Repo, Susanna; Souza, Michael L; Piovesan, Damiano; Casadio, Rita; Wang, Zheng; Cheng, Jianlin; Fang, Hai; Gough, Julian; Koskinen, Patrik; Törönen, Petri; Nokso-Koivisto, Jussi; Holm, Liisa; Cozzetto, Domenico; Buchan, Daniel W A; Bryson, Kevin; Jones, David T; Limaye, Bhakti; Inamdar, Harshal; Datta, Avik; Manjari, Sunitha K; Joshi, Rajendra; Chitale, Meghana; Kihara, Daisuke; Lisewski, Andreas M; Erdin, Serkan; Venner, Eric; Lichtarge, Olivier; Rentzsch, Robert; Yang, Haixuan; Romero, Alfonso E; Bhat, Prajwal; Paccanaro, Alberto; Hamp, Tobias; Kaßner, Rebecca; Seemayer, Stefan; Vicedo, Esmeralda; Schaefer, Christian; Achten, Dominik; Auer, Florian; Boehm, Ariane; Braun, Tatjana; Hecht, Maximilian; Heron, Mark; Hönigschmid, Peter; Hopf, Thomas A; Kaufmann, Stefanie; Kiening, Michael; Krompass, Denis; Landerer, Cedric; Mahlich, Yannick; Roos, Manfred; Björne, Jari; Salakoski, Tapio; Wong, Andrew; Shatkay, Hagit; Gatzmann, Fanny; Sommer, Ingolf; Wass, Mark N; Sternberg, Michael J E; Škunca, Nives; Supek, Fran; Bošnjak, Matko; Panov, Panče; Džeroski, Sašo; Šmuc, Tomislav; Kourmpetis, Yiannis A I; van Dijk, Aalt D J; ter Braak, Cajo J F; Zhou, Yuanpeng; Gong, Qingtian; Dong, Xinran; Tian, Weidong; Falda, Marco; Fontana, Paolo; Lavezzo, Enrico; Di Camillo, Barbara; Toppo, Stefano; Lan, Liang; Djuric, Nemanja; Guo, Yuhong; Vucetic, Slobodan; Bairoch, Amos; Linial, Michal; Babbitt, Patricia C; Brenner, Steven E; Orengo, Christine; Rost, Burkhard; Mooney, Sean D; Friedberg, Iddo.
In: Nature Methods, Vol. 10, No. 3, 03.2013, p. 221-7.Research output: Contribution to journal › Article › peer-review
A large-scale evaluation of computational protein function prediction. / Radivojac, Predrag; Clark, Wyatt T; Oron, Tal Ronnen; Schnoes, Alexandra M; Wittkop, Tobias; Sokolov, Artem; Graim, Kiley; Funk, Christopher; Verspoor, Karin; Ben-Hur, Asa; Pandey, Gaurav; Yunes, Jeffrey M; Talwalkar, Ameet S; Repo, Susanna; Souza, Michael L; Piovesan, Damiano; Casadio, Rita; Wang, Zheng; Cheng, Jianlin; Fang, Hai; Gough, Julian; Koskinen, Patrik; Törönen, Petri; Nokso-Koivisto, Jussi; Holm, Liisa; Cozzetto, Domenico; Buchan, Daniel W A; Bryson, Kevin; Jones, David T; Limaye, Bhakti; Inamdar, Harshal; Datta, Avik; Manjari, Sunitha K; Joshi, Rajendra; Chitale, Meghana; Kihara, Daisuke; Lisewski, Andreas M; Erdin, Serkan; Venner, Eric; Lichtarge, Olivier; Rentzsch, Robert; Yang, Haixuan; Romero, Alfonso E; Bhat, Prajwal; Paccanaro, Alberto; Hamp, Tobias; Kaßner, Rebecca; Seemayer, Stefan; Vicedo, Esmeralda; Schaefer, Christian; Achten, Dominik; Auer, Florian; Boehm, Ariane; Braun, Tatjana; Hecht, Maximilian; Heron, Mark; Hönigschmid, Peter; Hopf, Thomas A; Kaufmann, Stefanie; Kiening, Michael; Krompass, Denis; Landerer, Cedric; Mahlich, Yannick; Roos, Manfred; Björne, Jari; Salakoski, Tapio; Wong, Andrew; Shatkay, Hagit; Gatzmann, Fanny; Sommer, Ingolf; Wass, Mark N; Sternberg, Michael J E; Škunca, Nives; Supek, Fran; Bošnjak, Matko; Panov, Panče; Džeroski, Sašo; Šmuc, Tomislav; Kourmpetis, Yiannis A I; van Dijk, Aalt D J; ter Braak, Cajo J F; Zhou, Yuanpeng; Gong, Qingtian; Dong, Xinran; Tian, Weidong; Falda, Marco; Fontana, Paolo; Lavezzo, Enrico; Di Camillo, Barbara; Toppo, Stefano; Lan, Liang; Djuric, Nemanja; Guo, Yuhong; Vucetic, Slobodan; Bairoch, Amos; Linial, Michal; Babbitt, Patricia C; Brenner, Steven E; Orengo, Christine; Rost, Burkhard; Mooney, Sean D; Friedberg, Iddo.
In: Nature Methods, Vol. 10, No. 3, 03.2013, p. 221-7.Research output: Contribution to journal › Article › peer-review
}
TY - JOUR
T1 - A large-scale evaluation of computational protein function prediction
AU - Radivojac, Predrag
AU - Clark, Wyatt T
AU - Oron, Tal Ronnen
AU - Schnoes, Alexandra M
AU - Wittkop, Tobias
AU - Sokolov, Artem
AU - Graim, Kiley
AU - Funk, Christopher
AU - Verspoor, Karin
AU - Ben-Hur, Asa
AU - Pandey, Gaurav
AU - Yunes, Jeffrey M
AU - Talwalkar, Ameet S
AU - Repo, Susanna
AU - Souza, Michael L
AU - Piovesan, Damiano
AU - Casadio, Rita
AU - Wang, Zheng
AU - Cheng, Jianlin
AU - Fang, Hai
AU - Gough, Julian
AU - Koskinen, Patrik
AU - Törönen, Petri
AU - Nokso-Koivisto, Jussi
AU - Holm, Liisa
AU - Cozzetto, Domenico
AU - Buchan, Daniel W A
AU - Bryson, Kevin
AU - Jones, David T
AU - Limaye, Bhakti
AU - Inamdar, Harshal
AU - Datta, Avik
AU - Manjari, Sunitha K
AU - Joshi, Rajendra
AU - Chitale, Meghana
AU - Kihara, Daisuke
AU - Lisewski, Andreas M
AU - Erdin, Serkan
AU - Venner, Eric
AU - Lichtarge, Olivier
AU - Rentzsch, Robert
AU - Yang, Haixuan
AU - Romero, Alfonso E
AU - Bhat, Prajwal
AU - Paccanaro, Alberto
AU - Hamp, Tobias
AU - Kaßner, Rebecca
AU - Seemayer, Stefan
AU - Vicedo, Esmeralda
AU - Schaefer, Christian
AU - Achten, Dominik
AU - Auer, Florian
AU - Boehm, Ariane
AU - Braun, Tatjana
AU - Hecht, Maximilian
AU - Heron, Mark
AU - Hönigschmid, Peter
AU - Hopf, Thomas A
AU - Kaufmann, Stefanie
AU - Kiening, Michael
AU - Krompass, Denis
AU - Landerer, Cedric
AU - Mahlich, Yannick
AU - Roos, Manfred
AU - Björne, Jari
AU - Salakoski, Tapio
AU - Wong, Andrew
AU - Shatkay, Hagit
AU - Gatzmann, Fanny
AU - Sommer, Ingolf
AU - Wass, Mark N
AU - Sternberg, Michael J E
AU - Škunca, Nives
AU - Supek, Fran
AU - Bošnjak, Matko
AU - Panov, Panče
AU - Džeroski, Sašo
AU - Šmuc, Tomislav
AU - Kourmpetis, Yiannis A I
AU - van Dijk, Aalt D J
AU - ter Braak, Cajo J F
AU - Zhou, Yuanpeng
AU - Gong, Qingtian
AU - Dong, Xinran
AU - Tian, Weidong
AU - Falda, Marco
AU - Fontana, Paolo
AU - Lavezzo, Enrico
AU - Di Camillo, Barbara
AU - Toppo, Stefano
AU - Lan, Liang
AU - Djuric, Nemanja
AU - Guo, Yuhong
AU - Vucetic, Slobodan
AU - Bairoch, Amos
AU - Linial, Michal
AU - Babbitt, Patricia C
AU - Brenner, Steven E
AU - Orengo, Christine
AU - Rost, Burkhard
AU - Mooney, Sean D
AU - Friedberg, Iddo
PY - 2013/3
Y1 - 2013/3
KW - Algorithms
KW - Animals
KW - Computational Biology
KW - Databases, Protein
KW - Exoribonucleases
KW - Forecasting
KW - Humans
KW - Molecular Biology
KW - Molecular Sequence Annotation
KW - Proteins
KW - Species Specificity
U2 - 10.1038/nmeth.2340
DO - 10.1038/nmeth.2340
M3 - Article
C2 - 23353650
VL - 10
SP - 221
EP - 227
JO - Nature Methods
JF - Nature Methods
SN - 1548-7091
IS - 3
ER -