1. 2022
  2. Published

    A Chimeric TGA Repressor Slows Down Fruit Maturation and Ripening in Tomato: A Chimeric TGA Repressor Slows Down Fruit Maturation and Ripening in Tomato

    Lemaire-Chamley, M., Nogueira, M., Fraser, P. & Rothan, C., 19 Oct 2022, In: Plant and Cell Physiology. 63, p. 120 -134

    Research output: Contribution to journalArticlepeer-review

  3. Published

    The phytotoxin myrigalone A triggers a phased detoxification programme and inhibits Lepidium sativum seed germination via multiple mechanisms including interference with auxin homeostasis

    Nakabayashi, K., Walker, M., Irwin, D., Cohn, J., Guida-English, S., Garcia, L., Pavlovic, I., Novak, O., Tarkowska, D., Strnad, M., Perez Suarez, M., Seville, A., Stock, D. & Leubner-Metzger, G., 21 Apr 2022, In: International Journal of Molecular Sciences. 23, 9, 4618.

    Research output: Contribution to journalArticlepeer-review

  4. E-pub ahead of print

    Isolation and characterisation of sub-plastidial fractions from carotenoid rich fruits. Isolation of chromoplast sub-plastidial fractions

    Berry, H., Nogueira, M., Drapal, M., Almeida Barros da Silva, J., Perez, L., Enfissi, G. & Fraser, P., 17 Apr 2022, (E-pub ahead of print) Isolation and characterisation of sub-plastidial fractions from carotenoid rich fruits. : Isolation and characterisation of sub-plastidial fractions from carotenoid rich fruits. . Wurtzel, E. (ed.). Methods in Enzymology: Elsevier

    Research output: Chapter in Book/Report/Conference proceedingChapter

  5. Forthcoming

    Metabolomic approaches for the Characterisation of Carotenoid Metabolic Engineering in planta: Metabolomic Characterisation of Carotenoid Metabolic Engineering

    Perez, L., Drapal, M., Nogueira, M., Berry, H., Almeida Barros da Silva, J., Enfissi, G. & Fraser, P., 17 Apr 2022, (Accepted/In press) Metabolomic approaches for the Characterisation of Carotenoid Metabolic Engineering in planta: Metabolomic Characterisation of Carotenoid Metabolic Engineering. 1st ed. Vol. 670.

    Research output: Chapter in Book/Report/Conference proceedingChapter

  6. Published

    Molecular mechanisms of Arabidopsis seed dormancy release by gas plasma activated water technology

    Grainge, G., Nakabayashi, K., Steinbrecher, T., Kennedy, S., Ren, J., Iza, F. & Leubner-Metzger, G., 15 Apr 2022, In: Journal of Experimental Botany.

    Research output: Contribution to journalArticlepeer-review

  7. Published

    Jasmonates and Histone deacetylase 6 activate Arabidopsis genome-wide histone acetylation and methylation during the early acute stress response

    Vincent, S. A., Kim, J. M., Perez Salamo, I., To, T. K., Torii, C., Ishida, J., Tanaka, M., Endo, T. A., Bhat, P., Devlin, P., Seki, M. & Devoto, A., 11 Apr 2022, In: BMC Biology. 20, 83 (2022).

    Research output: Contribution to journalArticlepeer-review

  8. E-pub ahead of print

    The chemotype core collection of genus Nicotiana

    Drapal, M., Enfissi, G. & Fraser, P., 7 Apr 2022, (E-pub ahead of print) In: Plant Journal.

    Research output: Contribution to journalArticlepeer-review

  9. Published

    Multilevel interactions between native and ectopic isoprenoid pathways affect global metabolism in rice

    Perez, L., Perez-Fons, L., Fraser, P. & Christou, P., Apr 2022, In: Transgenic Research. 31

    Research output: Contribution to journalArticlepeer-review

  10. Forthcoming

    Datasets from harmonised metabolic phenotyping of root, tuber and banana crop

    Drapal, M., Perez, L., Price, E. & Fraser, P., Jun 2022, In: Data in Brief. 42, 108041.

    Research output: Contribution to journalArticlepeer-review

  11. Published

    Xyloglucan remodelling enzymes and the mechanics of plant seed and fruit biology

    Steinbrecher, T. & Leubner-Metzger, G., 2 Mar 2022, In: Journal of Experimental Botany. 73, 5, p. 1253-1257 5 p.

    Research output: Contribution to journalArticle

  12. Published

    Cold-induced secondary dormancy and its regulatory mechanisms in Beta vulgaris

    Hourston, J., Steinbrecher, T., Chandler, J., Perez Suarez, M., Dietrich, K., Turečková, V., Tarkowska, D., Strnad, M., Weltmeier, F., Meinhard, J., Fischer, U., FiedlerWiechers, K., Ignatz, M. & Leubner, G., 18 Jan 2022, In: Plant, Cell and Environment. p. 1315-1332

    Research output: Contribution to journalArticlepeer-review

  13. Forthcoming

    Salicylic acid-mediated disturbance increases bacterial diversity in the phyllosphere but is overcome by a dominant core community

    Vincent, S., Ebertz, A., Spanu, P. D. & Devlin, P., 18 Jan 2022, (Accepted/In press) In: Frontiers in microbiology.

    Research output: Contribution to journalArticlepeer-review

  14. 2021
  15. Published

    The influence of endophytes on rice fitness under environmental stresses

    Ganie, S., Bhat, J. A. & Devoto, A., 2 Dec 2021, In: Plant Molecular Biology.

    Research output: Contribution to journalArticlepeer-review

  16. E-pub ahead of print

    Seed-borne Cercospora beticola can initiate Cercospora leaf spot from sugar beet (Beta vulgaris L.) fruit tissue

    Spanner, R., Neubauer, J., Heick, T. M., Grusak, M. A., Hamilton, O., Rivera-Varas, V., de Jone, R., Pethybridge, S., Webb, K. M., Leubner-Metzger, G., Sector, G. A. & Bolton, M. D., 29 Nov 2021, (E-pub ahead of print) In: Phytopathology.

    Research output: Contribution to journalArticlepeer-review

  17. E-pub ahead of print

    Chloroplast development in green plant tissues: the interplay between light, hormone, and transcriptional regulation

    Cackett, L., Luginbuehl, L. H., Schreier, T. B., Lopez Juez, E. & Hibberd, J. M., 2 Nov 2021, (E-pub ahead of print) In: New Phytologist. 22, p. 151-167 17 p.

    Research output: Contribution to journalArticlepeer-review

  18. Published

    The esterification of xanthophylls in Solanum lycopersicum (tomato) chromoplasts; the role of a non-specific acyltransferase

    Lewis, E. R., Nogueira, M., Enfissi, G. & Fraser, P., Nov 2021, In: Phytochemistry. 191, 112912.

    Research output: Contribution to journalArticlepeer-review

  19. Published

    Molecular mechanisms and hormonal regulation underpinning morphological dormancy: a case study using Apium graveolens (Apiaceae)

    Walker, M., Perez Suarez, M., Steinbrecher, T., Gawthrop, F., Pavlovic, I., Novak, O., Tarkowska, D., Strnad, M., Marone, F., Nakabayashi, K. & Leubner-Metzger, G., 27 Sep 2021, In: Plant Journal. 108, 4, p. 1020-1036 17 p.

    Research output: Contribution to journalArticlepeer-review

  20. E-pub ahead of print

    Metabolic changes in leaves of N. tabacum and N. benthamiana during plant development

    Drapal, M., Enfissi, G. & Fraser, P., 29 Jul 2021, (E-pub ahead of print) In: Journal of Plant Physiology. 153486.

    Research output: Contribution to journalArticlepeer-review

  21. Published

    Mass spectrometry-based metabolomics: a guide for annotation, quantification and best reporting practices

    Alseekh, S., Aharoni, A., Brotman, Y., Contrepois, K., D'Auria, J., Ewald, J., Ewald, J., Fraser, P., Giavalisco, P., Hall, R. D., Heinemann, M., Link, H., Luo, J., Neumann, S., Nielsen, J., Perez de Souza, L., Saito, K., Sauer, U., Schroeder, F. C., Schuster, S. & 12 others, Siuzdak, G., Skirycz, A., Sumner, L. W., Snyder, M. P., Tang, H., Tohge, T., Wang, Y., Wen, W., Wu, S., Xu, G., Zamboni, N. & Fernie, A. R., 8 Jul 2021, In: Nature Methods. 18, p. 747-756 10 p.

    Research output: Contribution to journalArticlepeer-review

  22. Published

    A tale of two morphs: developmental patterns and mechanisms of seed coat differentiation in the dimorphic diaspore model Aethionema arabicum (Brassicaceae)

    Arshad, W., Lenser, T., Wilhelmsson, P., Chandler, J., Steinbrecher, T., Marone, F., Perez Suarez, M., Collinson, M., Stuppy, W., Rensing, S., Theißen, G. & Leubner-Metzger, G., Jul 2021, In: Plant Journal. 107, 1, p. 166-181 16 p.

    Research output: Contribution to journalArticlepeer-review

  23. Published

    A transcriptomic, metabolomic and cellular approach to the physiological adaptation of tomato fruit to high temperature

    Almeida Barros da Silva, J., Perez, L. & Fraser, P., Jul 2021, In: Plant, Cell and Environment. 44, 7, p. 2211-2229

    Research output: Contribution to journalArticlepeer-review

  24. Published

    A domestication-associated gene, CsLH, encodes a phytochrome B protein that regulates hypocotyl elongation in cucumber.

    Liu, B., Weng, J., Guan, D., Zhang, Y., Niu, Q., Lopez Juez, E., Lai, Y., Garcia-Mas, J. & Huang, D., 16 Jun 2021, In: Molecular Horticulture. 1, 3.

    Research output: Contribution to journalArticlepeer-review

  25. Published

    Seed dormancy and weed emergence: from simulating environmental change to understanding trait plasticity, adaptive evolution, and population fitness

    Nakabayashi, K. & Leubner-Metzger, G., 28 May 2021, In: Journal of Experimental Botany. 72, 12, p. 4181-4185 5 p.

    Research output: Contribution to journalArticle

  26. Published

    Cellular and transcriptomic analyses reveal two-staged chloroplast biogenesis underpinning photosynthesis build-up in the wheat leaf

    Loudya, N., Mishra, P., Takahagi, K., Uehara-Yamaguchi, Y., Inoue, K., Bogre, L., Mochida, K. & Lopez Juez, E., 11 May 2021, In: Genome Biology. 22, 151.

    Research output: Contribution to journalArticlepeer-review

  27. Published

    Metabolic effects of agro-infiltration on N. benthamiana accessions

    Drapal, M., Enfissi, G. & Fraser, P., 28 Apr 2021, In: Transgenic Research.

    Research output: Contribution to journalArticlepeer-review

  28. Published

    Aethionema arabicum genome annotation using PacBio full-length transcripts provides a valuable resource for seed dormancy and Brassicaceae evolution research

    Fernandez-Pozo, N., Metz, T., Chandler, J., Gramzow, L., Merai, Z., Maumus, F., Mittelsten Scheid, O., Theißen, G., Schranz, M. E., Leubner-Metzger, G. & Rensing, S., Apr 2021, In: Plant Journal. 106, 1, p. 275-293 19 p.

    Research output: Contribution to journalArticlepeer-review

  29. E-pub ahead of print

    New Plant Breeding Techniques and their regulatory implications: An opportunity to advance metabolomics approaches

    Enfissi, E., Drapal, M., Perez-Fons, L., Nogueira, M., Berry, H., Almeida, J. & Fraser, P., 6 Feb 2021, (E-pub ahead of print) In: Journal of Plant Physiology. 153378.

    Research output: Contribution to journalArticlepeer-review

  30. E-pub ahead of print

    Understanding colour retention in red chilli pepper fruit using a metabolite profiling approach

    Berry, H., Lai, F., Kende, A., Rickett, D., Baxter, C., Enfissi, E. & Fraser, P., 26 Jan 2021, (E-pub ahead of print) In: Food Chemistry. 100013.

    Research output: Contribution to journalArticlepeer-review

  31. Published
  32. 2020
  33. Submitted

    Integrated metabolite and gene expression profiling of the isoprenoid regulatory network in de-etiolated rice seedlings upon exposure to light

    Drapal, M. & Fraser, P., 10 Dec 2020, (Submitted) In: Physiologia Plantarum.

    Research output: Contribution to journalArticle

  34. Published

    Wayang sebagai Media Ekologi: Buku Pintar Kreativitas pada Masa Perubahan Iklim: Dampak Perubahan Iklim pada Tumbuhan dan Ekosistem di Indonesia: Ancaman dan Usulan Solusi.

    Devoto, A., 1 Dec 2020, Wayang sebagai Media Ekologi: Buku Pintar Kreativitas pada Masa Perubahan Iklim : Dampak Perubahan Iklim pada Tumbuhan dan Ekosistem di Indonesia: Ancaman dan Usulan Solusi. Jl. Ngadinegaran MJ III/ 100; Yogyakarta 55143, Indonesia, p. 17-21 5 p. 2

    Research output: Chapter in Book/Report/Conference proceedingChapter

  35. Published

    Characterisation of Thai strawberry (Fragaria × ananassa Duch.) cultivars with RAPD markers and metabolite profiling techniques

    Sirijan, M., Drapal, M., Chaiprasart, P. & Fraser, P., Dec 2020, In: Phytochemistry. 180, 112522.

    Research output: Contribution to journalArticlepeer-review

  36. Published

    The effect of β-cyclocitral treatment on the carotenoid content of transgenic Marsh grapefruit (Citrus paradisi Macf.) suspension-cultured cells

    Zheng, X., Zhu, K., Ye, J., Price, E., Deng, X. & Fraser, P., Dec 2020, In: Phytochemistry. 180, 8 p., 112509.

    Research output: Contribution to journalArticlepeer-review

  37. E-pub ahead of print

    Jasmonates induce Arabidopsis bioactivities selectively inhibiting the growth of breast cancer cells through CDC6 and mTOR

    Bomer, M., Perez-Salamo, I., Florance, H., Salmon, D., Dudenhoffer, J-H., Finch, P., Cinar, A., Smirnoff, N., Harvey, A. & Devoto, A., 29 Oct 2020, (E-pub ahead of print) In: New Phytologist. 229, 4, p. 2120-2134 15 p.

    Research output: Contribution to journalArticlepeer-review

  38. Published

    Inactivation of rice starch branching enzyme IIb triggers broad and unexpected changes in metabolism by transcriptional reprogramming

    Baysal, C., He, W., Drapal, M., Villorbina, G., Medina, V., Capell, T., Khush, G., Zhu, C., Fraser, P. & Christou, P., 20 Oct 2020, In: Proceedings of the National Academy of Sciences of the United States of America. 117, 42, p. 26503-26512 10 p.

    Research output: Contribution to journalArticlepeer-review

  39. E-pub ahead of print

    Coleorhiza-enforced seed dormancy: a novel mechanism to control germination in grasses

    Holloway, T., Steinbrecher, T., Perez, M., Seville, A., Stock, D., Nakabayashi, K. & Leubner-Metzger, G., 24 Sep 2020, (E-pub ahead of print) In: New Phytologist. 229, 4, p. 2179-2191 13 p.

    Research output: Contribution to journalArticlepeer-review

  40. Published

    Between a rock and a hard place: adaptive sensing and site-specific dispersal

    Nichols, B., Leubner-Metzger, G. & Jansen, V. A. A., Sep 2020, In: Ecology Letters. 23, 9, p. 1370-1379 10 p.

    Research output: Contribution to journalArticlepeer-review

  41. Published

    Assessment of metabolic variability and diversity present in leaf, peel and pulp tissue of diploid and triploid Musa spp.

    Drapal, M. & Fraser, P., Aug 2020, In: Phytochemistry. 176, p. 1-9 9 p., 112388.

    Research output: Contribution to journalArticlepeer-review

  42. Published

    Retrograde signalling in a virescent mutant triggers an anterograde delay of chloroplast biogenesis that requires GUN1 and is essential for survival

    Loudya, N., Okunola, T., He, J., jarvis, P. & Lopez Juez, E., 22 Jun 2020, In: Philosophical Transactions of the Royal Society of London B: Biological Sciences. 375, 1801, p. 1-16 16 p., RSTB-2019-0400.R1.

    Research output: Contribution to journalArticlepeer-review

  43. Published

    Analysis of Tomato Post-Harvest Properties: Fruit Color, Shelf Life, and Fungal Susceptibility

    Thole, V., Vain, P., Yang, R. Y., Almeida Barros da Silva, J., Enfissi, E. M. A., Nogueira, M., Price, E. J., Alseekh, S., Fernie, A. R., Fraser, P. D., Hanson, P. & Martin, C., Jun 2020, In: Current protocols in plant biology. 5, 2, p. 1-17 17 p., e20108.

    Research output: Contribution to journalArticlepeer-review

  44. E-pub ahead of print

    Exploring the chemotypes underlying important agronomic and consumer traits in cassava (Manihot esculenta Crantz)

    Drapal, M. & Fraser, P., 26 May 2020, (E-pub ahead of print) In: Journal of Plant Physiology. 153206.

    Research output: Contribution to journalArticle

  45. Published

    The effects of high oxygen partial pressure on vegetable Allium seeds with a short shelf-life

    Hourston, J., Perez Suarez, M., Gawthrop, F., Richards, M., Steinbrecher, T. & Leubner, G., 16 May 2020, In: Planta. 251, p. 1-9 9 p., 105.

    Research output: Contribution to journalArticlepeer-review

  46. Published

    Transcription Factors FHY3 and FAR1 Regulate Light-induced CIRCADIAN CLOCK ASSOCIATED1 Gene Expression in Arabidopsis

    Liu, Y., Ma, M., Li, G., Yuan, L., Xie, Y., Wei, H., Ma, X., Li, Q., Devlin, P., Xu, X. & Wang, H., May 2020, In: Plant Cell. 32, 5, p. 1464-1478 15 p.

    Research output: Contribution to journalArticlepeer-review

  47. Published

    Rocket Science: The Effect of Spaceflight on Germination Physiology, Ageing, and Transcriptome of Eruca sativa Seeds

    Chandler, J., Haas, F., Khan, S., Bowden, L., Ignatz, M., Enfissi, G., Gawthrop, F., Griffiths, A., Fraser, P., Rensing, S. & Leubner, G., 24 Apr 2020, In: Life. 10, 4, p. 1-25 25 p., 49.

    Research output: Contribution to journalArticlepeer-review

  48. E-pub ahead of print

    Cooking dependent loss of metabolites in potato breeding lines and their wild and landrace relatives

    Drapal, M. & Fraser, P., 1 Feb 2020, (E-pub ahead of print) In: Journal of Food Composition and Analysis. 103432.

    Research output: Contribution to journalArticlepeer-review

  49. E-pub ahead of print

    ErbB-3 BINDING PROTEIN 1 Regulates Translation and Counteracts RETINOBLASTOMA RELATED to Maintain the Root Meristem

    Lokdarshi, A., Papdi, C., Pettkó-Szandtner, A., Dorokhov, S., Scheres, B., Magyar, Z., von Arnim, A. G., Bogre, L. & Horvath, B., 31 Jan 2020, (E-pub ahead of print) In: Plant physiology. 182, 2, p. 919-932 14 p.

    Research output: Contribution to journalArticlepeer-review

  50. Published

    E2FB Interacts with RETINOBLASTOMA RELATED and Regulates Cell Proliferation during Leaf Development

    Őszi, E., Papdi, C., Mohammed, B., Petkó-Szandtner, A., Leviczky, T., Molnár, E., Galvan-Ampudia, C., Safina, K., Lopez Juez, E., Horvath, B., Bogre, L. & Magyar, Z., 6 Jan 2020, In: Plant physiology. 182, 1, p. 518-533 16 p.

    Research output: Contribution to journalArticlepeer-review

  51. Published

    Fracture of the dimorphic fruits of Aethionema arabicum (Brassicaceae)

    Arshad, W., Marone, F., Collinson, M., Leubner-Metzger, G. & Steinbrecher, T., Jan 2020, In: Botany. 98, p. 65-75 11 p.

    Research output: Contribution to journalArticlepeer-review

  52. 2019
  53. E-pub ahead of print

    Metabolite database for root, tuber and banana crops to facilitate modern breeding in understudied crops

    Price, E., Drapal, M., Perez, L. & Fraser, P., 17 Dec 2019, (E-pub ahead of print) In: Plant Journal. p. 1-11 11 p.

    Research output: Contribution to journalArticlepeer-review

  54. Published

    A metabolomics characterisation of natural variation in the resistance of cassava to whitefly

    Perez, L. & Fraser, P., 27 Nov 2019, In: BMC Biology. 19, p. 1-14 14 p., 518.

    Research output: Contribution to journalArticlepeer-review

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