Plant Molecular Sciences

The assessment of changes to the nontuberculous mycobacteria metabolome in response to anti-TB drugs

Fraser, P., Drapal, M. & Wheeler, P. R. 26 Jun 2018 In : FEMS Microbiology Letters.

Research output: Contribution to journal › Article

COI1-dependent jasmonate signalling affects growth, metabolites production and cell wall protein composition in arabidopsis

Devoto, A. 19 Jun 2018 In : Annals of Botany. p. 1-13 13 p.

Research output: Contribution to journal › Article

Carotenoid profiling of yams: Clarity, comparisons and diversity

Fraser, P. & Price, E. 27 Mar 2018 In : Food Chemistry. 259, p. 130-138

Research output: Contribution to journal › Article

Tissue and cellular mechanics of seeds

Steinbrecher, T. & Leubner, G. 20 Mar 2018 In : Current Opinion in Genetics & Development. 51, p. 1-10

Research output: Contribution to journal › Article

Soil Inoculation with Bacillus spp. Modifies Root Endophytic Bacterial Diversity, Evenness, and Community Composition in a Context-Specific Manner

Gadhave, K., Devlin, P., Ebertz, A., Ross, A. & Gange, A. 6 Mar 2018 In : Microbial Ecology. p. 1-10 10 p.

Research output: Contribution to journal › Article

Detection and Enhancement of Ketocarotenoid Accumulation in the Newly Isolated Sarcinoid Green Microalga Chlorosarcinopsis PY02

Cherdchukeattisak, P., Fraser, P., Purton, S. & Wannathong Brocklehurst, T. 12 Feb 2018 In : Open biology. 7, 1

Research output: Contribution to journal › Article

Extending our tools and resources in the non-conventional industrial yeast Xanthophyllomyces dendrorhous through the application of metabolite profiling methodologies.

Alcalde Rodriguez, E. & Fraser, P. 12 Feb 2018 In : Metabolomics. 14, 3

Research output: Contribution to journal › Article

Creating plant molecular factories for industrial and nutritional isoprenoid production

Nogueira, M., Enfissi, E., Almeida Barros da Silva, J. & Fraser, P. 1 Feb 2018 In : Current Opinion in Biotechnology. 49, p. 80-87 8 p.

Research output: Contribution to journal › Article

Finite indentation of highly curved elastic shells

Pearce, S., King, J., Steinbrecher, T., Leubner, G., Everitt, N. & Holdsworth, M. 24 Jan 2018 In : Proceedings of the Royal Society A: Mathematical, Physical & Engineering Sciences. 474, 20170482

Research output: Contribution to journal › Article

Converging light, energy and hormonal signalling control meristem activity, leaf initiation and growth

Mohammed, B., Farahi Bilooei, S., Dóczi, R., Grove, E., Railo, S., Palme, K., Ditengou, F. A., Bogre, L. & Lopez Juez, E. 28 Dec 2017 In : Plant Physiology.

Research output: Contribution to journal › Article

Co-evolving MAPK and PID Phosphosites Indicate an Ancient Environmental Control of PIN Auxin Transporters in Land Plants: Regulation of PIN by MAPK signalling

Bogre, L., Dory, M., Hatzimasoura, E., Kállai, B. M., Nagy, S. K., Jäger, K., Darula, Z., Nádai, T. V., Mészáros, T., Lopez Juez, E., Barnabás, B., Palme, K., Ditengou, F. A. & Dóczi, R. 25 Dec 2017 In : FEBS Letters. FEBSL-17-0935.R2

Research output: Contribution to journal › Letter

What causes peduncle necking in cut Rosa hybrida? Transcriptome analysis of rose stem tissue and analysis of microbial load

Lear, B., Marchbank, A., Kent, N., Tansey, K., Andrews, R., Wheeler, T., Crompton, R., Devlin, P., Rogers, H. J. & Stead, A. 15 Dec 2017 In : Acta Horticulturae.

Research output: Contribution to journal › Meeting abstract

Fruit fracture biomechanics and the release of Lepidium didymum pericarp-imposed mechanical dormancy by fungi

Sperber, K., Steinbrecher, T., Graeber, K., Scherer, G., Clausing, S., Wiegand, N., Hourston, J., Kurre, R., Leubner, G. & Mummenhoff, K. 30 Nov 2017 In : Nature Communications. 8, 11 p., 1868

Research output: Contribution to journal › Article

Engineering of tomato for the sustainable production of ketocarotenoids and its evaluation in aquaculture feed

Nogueira, M., Enfissi, E., martinez, M., Driller, L., Schuch, W., Sandmann, G. & Fraser, P. 1 Oct 2017 In : Proceedings of the National Academy of Sciences of the United States of America. 114, 41, p. 10876–10881 6 p.

Research output: Contribution to journal › Article

Improving Crop Seed Quality and Seedling Performance

Leubner, G. Sep 2017 In : IMPACT. 7, p. 81-83 4 p.

Research output: Contribution to journal › Article

Arabidopsis RETINOBLASTOMA RELATED directly regulates DNA damage responses through functions beyond cell cycle control: Role of RBR, E2FA, AtBRCA1 in plant DDR

Bogre, L., Horvath, B., Kourova, H., Nagy, S., Nemeth, E., Magyar, Z., Papdi, C., Ahmad, Z., Sanchez-Perez, G. F., Perilli, S., Pettkó-Szandtner, A., Darula, Z., Meszaros, T., Binarova, P., Scheres, B. & Blilou, I. 3 Apr 2017 In : EMBO Journal . 36, 7, 89 p., EMBOJ-2016-94561R1

Research output: Contribution to journal › Article

Identification of metabolites associated with water stress responses in Solanum tuberosum L. clones

Fraser, P. & Drapal, M. 1 Mar 2017 In : Phytochemistry. 135, p. 24–33 10 p.

Research output: Contribution to journal › Article

The regulation of carotenoid formation in tomato fruit

Enfissi, E., Nogueira, M., Fraser, P. & Bramley, P. 7 Feb 2017 In : Plant Journal. 89, 4, p. 774–788 15 p.

Research output: Contribution to journal › Article

The biomechanics of seed germination

Steinbrecher, T. & Leubner, G. 1 Feb 2017 In : Journal of Experimental Botany. 68, p. 765-783 19 p.

Research output: Contribution to journal › Article

The formation and sequestration of non-endogenous ketocarotenoids in transgenic Nicotiana glauca

Mortimer, C., Bramley, P. & Fraser, P. 1 Feb 2017 In : Plant Physiology. 173, 2

Research output: Contribution to journal › Article

Biomechanical Properties of Wheat Grains: the implications on Milling

Hourston, J., Ignatz, M., Reith, M., Leubner, G. & Steinbrecher, T. 18 Jan 2017 In : Journal of the Royal Society. Interface. 14, 126

Research output: Contribution to journal › Article

Antioxidant compounds and their bioaccessibility in tomato fruit and puree obtained from a DETIOLATED-1 (DET-1) down-regulated genetically modified genotype

Talens, P., Mora, L., Bramley, P. & Fraser, P. 15 Dec 2016 In : Food Chemistry. 213, p. 735–741 7 p.

Research output: Contribution to journal › Article

DREAMs make plant cells to cycle or to become quiescent

Bogre, L., Magyar, Z. & Ito, M. 1 Dec 2016 In : Current Opinion in Plant Biology. 34, p. 100-106 7 p.

Research output: Contribution to journal › Literature review

Metabolite profiling of Phycomyces blakesleeanus carotene mutants reveals global changes across intermediary metabolism

Alcalde Rodriguez, E. & Fraser, P. 23 Nov 2016 In : Microbiology.

Research output: Contribution to journal › Article

Rapid identification of causal mutations in tomato EMS populations via mapping-by-sequencing

Fraser, P. 3 Nov 2016 In : Nature Protocols. 11, p. 2401–2418 18 p.

Research output: Contribution to journal › Article

Developmental control and plasticity of fruit and seed dimorphism in Aethionema arabicum

Lenser, T. , Graeber, K. , Adigüzel, N. , Batur, Ö. S. , Dönmez, A. A. , Grosche, C. , Klettermann, M. , Mayland-Quellhorst, S. , Merai, Z. , Mohammadin, S. , Nguyen, T-P. , Rümpler, F. , Schulze, C. , Sperber, K. , Steinbrecher, T. , Wiegand, N. , Strnad, M. , Mittelsten Scheid, O. , Rensing, S. , Schranz, M. E. & 3 others Theißen, G., Mummenhoff, K. & Leubner-Metzger, G. 4 Oct 2016 In : Plant Physiology. 172, November, p. 1691-1707 17 p., PP2016-00838R1

Research output: Contribution to journal › Article

Towards the development of a sustainable soya bean-based feedstock for aquaculture

Fraser, P. 13 Sep 2016 In : Plant biotechnology journal.

Research output: Contribution to journal › Article

Genetic modification of tomato with the tobacco lycopene β-cyclase gene produces high β-carotene and lycopene fruit

Louise, R., Schuch, W., Fraser, P. & Bramley, P. 1 Sep 2016 In : Zeitschrift für Naturforschung C. 71, 9-10, p. 295–301 7 p.

Research output: Contribution to journal › Article

Engineered maize as a source of astaxanthin: processing and application as fish feed

Nogueira, M., Fraser, P. & SANDMANN, G. 12 Aug 2016 In : Transgenic Research. TRAg-D-16-00072R1, p. 1-9 9 p.

Research output: Contribution to journal › Article

Metabolite analysis of Mycobacterium species under aerobic and hypoxic conditions reveals common metabolic traits

Drapal, M., Wheeler, P. R. & Fraser, P. 1 Aug 2016 In : Microbiology. p. 1456-1467 12 p.

Research output: Contribution to journal › Article

Genetic improvement of tomato by targeted control of fruit softening

Selman, U., Chapman, N. H., Rebecca, S., Poole, M., Gary, A., B Richard, G., M D Talbot, B., Judith, S., Susy, S., Perez-Fons, L., Fraser, P., A Gregory, T., Grierson, D. & Seymour, G. 25 Jul 2016 In : Nature biotechnology.

Research output: Contribution to journal › Article

Subchromoplast fractionation protocol for different Solanaceae fruit species

Nogueira, M., Berry, H., Nohl, R., Klompmaker, M., Holden, A. & Fraser, P. 5 Jul 2016 In : Bio-Protocol. 6, 13, p. 1-14 14 p.

Research output: Contribution to journal › Article

Plants wait for the lights to change to red

Devlin, P. 24 Jun 2016 In : Proceedings of the National Academy of Sciences of the United States of America. p. 1-3 3 p.

Research output: Contribution to journal › Article

DRACULA2 is a dynamic nucleoporin with a role in the regulation of the shade avoidance syndrome in Arabidopsis

Gallemí, M., Galstyan, A., Paulišić, S., Then, C., Ferrández-Ayela, A., Lorenzo-Orts, L., Roig-Villanova, I., Wang, X., Micol, J. L., Ponce, M. R., Devlin, P. & Martinez-Garcia, J. 17 Mar 2016 In : Development (Cambridge, England). p. 1-41 41 p.

Research output: Contribution to journal › Article

Metabolic engineering of astaxanthin biosynthesis in maize endosperm and characterization of a prototype high oil hybrid

Fraser, P. 1 Mar 2016 In : Transgenic Research. TRAG-D-15-00179R1, p. 1-13 13 p.

Research output: Contribution to journal › Article

FHY3 and FAR1 Act Downstream of Light Stable Phytochromes

Siddiqui, H., Khan, S., Rhodes, B. & Devlin, P. 22 Feb 2016 In : Frontiers in Plant Science. 7, p. 1-10 10 p., 175

Research output: Contribution to journal › Article

Mildew-omics: How global analyses aid the understanding of life and evolution of powdery mildews

Laurence V. Bindschedler, Ralph Panstruga* and Pietro D. Spanu 15 Feb 2016 In : Frontiers in Plant Science.

Research output: Contribution to journal › Literature review

Interactions between the powdery mildew effector BEC1054 and barley proteins identify candidate host targets

Helen G. Pennington, Dana M. Gheorghe, Annabelle Damerum, Clara Pliego, Pietro D. Spanu, Rainer Cramer, and Laurence V. Bindschedler 27 Jan 2016 In : Journal of Proteome Research.

Research output: Contribution to journal › Article

Measurement issues associated with quantitative molecular biology analysis of complex food matrices for the detection of food fraud

Burns, M., Wiseman, G., Knight, A., Bramley, P., Foster, L., Rollinson, S., Damant, A. & Primrose, S. 1 Jan 2016 In : The Analyst. 141, 1, p. 45-61 16 p.

Research output: Contribution to journal › Article

Product stability and sequestration mechanisms in Solanum tuberosum engineered to biosynthesize high value ketocarotenoids

Mortimer, C., Misawa, N., Ducreux, L., Campbell, R., Bramley, P., Taylor, M. & Fraser, P. 1 Jan 2016 In : Plant biotechnology journal. 14, 1, p. 140-152 13 p.

Research output: Contribution to journal › Article

Chloroplast biogenesis-associated nuclear genes: Control by plastid signals evolved prior to their regulation as part of photomorphogenesis.

Hills, A. C., Khan, S. & Lopez Juez, E. 10 Dec 2015 In : Frontiers in Plant Science. 6, 1078

Research output: Contribution to journal › Article

Chloroplast biology: cost-benefit analysis

Lopez Juez, E. 1 Dec 2015 In : Nature Plants. p. 1-2 2 p.

Research output: Contribution to journal › Book/Film/Article review

Evolution of the EKA family of powdery mildew avirulence-effector genes from the ORF 1 of a LINE retrotransposon

Joelle Amselem, Marielle Vigouroux, Simone Oberhaensli, James K. M. Brown, Laurence V. Bindschedler, Pari Skamnioti, Thomas Wicker, Pietro D. Spanu, Hadi Quesneville and Soledad Sacristán 10 Nov 2015 In : BMC Genomics. 16, p. 1-14 14 p., 917

Research output: Contribution to journal › Article

MYB3Rs, plant homologs of Myb oncoproteins, control cell cycle-regulated transcription and form DREAM-like complexes

Kobayashi, K., Suzuki, T., Iwata, E., Magyar, Z., Bogre, L. & Ito, M. 9 Nov 2015 In : Transcription. 6, 5, p. 106-11 6 p.

Research output: Contribution to journal › Article

Low-temperature-specific effects of PHYTOCHROME C on the circadian clock in Arabidopsis suggest that PHYC underlies natural variation in biological timing

Edwards, K., Guerineau, F., Devlin, P. & Millar, A. 5 Nov 2015 In : bioRxiv. 10.1101/030577

Research output: Contribution to journal › Article

Standards for plant synthetic biology: a common syntax for exchange of DNA parts

Patron, N. , Orzaez, D. , Marillonnet, S. , Warzecha, H. , Matthewman, C. , Youles, M. , Raitskin, O. , Leveau, A. , Farre, G. , Rogers, C. , Smith, A. , Hibberd, J. , Webb, A. A. R. , Locke, J. , Schornack, S. , Ajioka, J. , Baulcombe, D. C. , Zipfel, C. , Kamoun, S. , Jones, J. D. G. & 38 others Kuhn, H., Robatzek, S., Van Esse, H. P., Sanders, D., Oldroyd, G., Martin, C., Field, R., O'Connor, S., Fox, S., Wulff, B., Miller, B., Breakspear, A., Radhakrishnan, G., Delaux, P-M., Loque, D., Granell, A., Tissier, A., Shih, P., Brutnell, T. P., Quick, W. P., Rischer, H., Fraser, P., Aharoni, A., Raines, C., South, P. F., Ane, J-M., Hamberger, B. R., Langdale, J., Stougaard, J., Bouwmeester, H., Udvardi, M., Murray, J. A. H., Ntoukakis, V., Schaefer, P., Denby, K., Edwards, K. J., Osbourn, A. & Haseloff, J. Oct 2015 In : New Phytologist. 208, 1, p. 13-19 7 p.

Research output: Contribution to journal › Article

Broadly Conserved Fungal Effector BEC1019 Suppresses Host Cell Death and Enhances Pathogen Virulence in Powdery Mildew of Barley (Hordeum vulgare L.).

Ehren Whigham, Shan Qi, Divya Mistry, Priyanka Surana, Ruo Xu, Gregory Fuerst, Clara Pliego, Laurence V. Bindschedler, Pietro D. Spanu, Julie A. Dickerson, Roger W. Innes, Dan Nettleton, Adam J. Bogdanove, and Roger P. Wise 1 Sep 2015 In : Molecular plant-Microbe interactions. 28, 9, p. 968-983 16 p.

Research output: Contribution to journal › Article

Transcriptional repression by MYB3R proteins regulates plant organ growth

Kobayashi, K. , Suzuki, T. , Iwata, E. , Nakamichi, N. , Suzuki, T. , Chen, P. , Ohtani, M. , Ishida, T. , Hosoya, H. , Müller, S. , Leviczky, T. , Pettkó-Szandtner, A. , Darula, Z. , Iwamoto, A. , Nomoto, M. , Tada, Y. , Higashiyama, T. , Demura, T. , Doonan, J. H. , Hauser, M-T. & 5 others Sugimoto, K., Umeda, M., Magyar, Z., Bogre, L. & Ito, M. 11 Jun 2015 In : EMBO Journal . 34, 15, p. 1992-2007 16 p.

Research output: Contribution to journal › Article

The Arabidopsis mitogen-activated protein kinase 6 is associated with γ-tubulin on microtubules, phosphorylates EB1c and maintains spindle orientation under nitrosative stress

Kohoutová, L., Kourová, H., Nagy, S. K., Volc, J., Halada, P., Mészáros, T., Meskiene, I., Bogre, L. & Binarová, P. 9 Jun 2015 In : New Phytologist. 207, 4, p. 1061-74 14 p.

Research output: Contribution to journal › Article

The low oxygen, oxidative and osmotic stress responses synergistically act through the ethylene response factor VII genes RAP2.12, RAP2.2 and RAP2.3.

Papdi, C., Perez-Salamo, I., Joseph, M. P., Giuntoli, B., Bogre, L., Koncz, C. & Szabados, L. 27 May 2015 In : Plant Journal. 82, 5, p. 772-784 13 p.

Research output: Contribution to journal › Article

Optimising ketocarotenoid production in potato tubers: Effect of genetic background, transgene combinations and environment

Campbell, R., Morris, W. L., Mortimer, C. L., Misawa, N., Ducreux, L. J. M., Morris, J. A., Hedley, P. E., Fraser, P. D. & Taylor, M. A. 1 May 2015 In : Trends in Plant Science. 234, p. 27-37 11 p.

Research output: Contribution to journal › Article

Activation of AtMPK9 through autophosphorylation that makes it independent of the canonical MAPK cascades

Nagy, S. K., Darula, Z., Kállai, B. M., Bogre, L., Bánhegyi, G., Medzihradszky, K. F., Horváth, G. V. & Mészáros, T. 1 Apr 2015 In : Biochemical Journal. 467, 1, p. 167-175 9 p.

Research output: Contribution to journal › Article

Auxin involvement in tepal senescence and abscission in Lilium: a tale of two lilies

Lombardi, L., Arrom, L., Mariotti, L., Battelli, R., Picciarelli, P., Kille, P., Stead, A., Munne-Bosch, S. & Rogers, H. J. 1 Feb 2015 In : Journal of Experimental Botany. 66, 3, p. 945-956 12 p.

Research output: Contribution to journal › Article

Metabolite profiling in LC-DAD using multivariate curve resolution: the alsace package for R

Wehrens, R., Carvalho, E. & Fraser, P. D. 1 Feb 2015 In : Metabolomics. 11, 1, p. 143-154 12 p.

Research output: Contribution to journal › Article

Peptides naturally generated from ubiquitin-60S ribosomal protein as potential biomarkers of dry-cured ham processing time

Mora, L., Gallego, M., Concepcion Aristoy, M., Fraser, P. D. & Toldra, F. 1 Feb 2015 In : Food control. 48, p. 102-107 6 p.

Research output: Contribution to journal › Article

Annotation and functional assignment of the genes for the C-30 carotenoid pathways from the genomes of two bacteria: Bacillus indicus and Bacillus firmus

Steiger, S., Perez-Fons, L., Cutting, S. M., Fraser, P. D. & Sandmann, G. 1 Jan 2015 In : Microbiology (Reading, England). 161, 1, p. 194-202 9 p.

Research output: Contribution to journal › Article

Promotion of Testa Rupture during Lepidium sativum Germination Involves Seed Compartment-Specific Expression and Activity of Pectin Methylesterases

Scheler, C., Weitbrecht, K., Pearce, S., Hampstead, A., Büttner-Mainik, A., Lee, K. J. D., Voegele, A., Oracz, K., Dekkers, B. J. W., Wang, X., Wood, A., Bentsink, L., King, J. R., Knox, P., Holdsworth, M., Müller, K. & Leubner-Metzger, G. Jan 2015 In : Plant Physiology. 167, p. 200-215 16 p., PLANTPHYSIOL/2014/247429

Research output: Contribution to journal › Article

The application of metabolite profiling to Mycobacterium spp.: Determination of metabolite changes associated with growth

Drapal, M., Perez-Fons, L., Wheeler, P. R. & Fraser, P. D. Nov 2014 In : Journal of microbiological methods. 106, p. 23-32 10 p.

Research output: Contribution to journal › Article

Methyl 5-glucosyl-5,6-dihydro-apo-4,4 '-lycopenoate, a novel antioxidative glyco-C-30-carotenoic acid produced by a marine bacterium Planococcus maritimus (vol 61, pg 729, 2008)

Shindo, K., Endo, M., Miyake, Y., Wakasugi, K., Morritt, D., Bramley, P. M., Fraser, P. D., Kasai, H. & Misawa, N. Oct 2014 In : Journal of Antibiotics. 67, 10, p. 731-732 2 p.

Research output: Contribution to journal › Article

DELAY OF GERMINATION 1 mediates a conserved coat-dormancy mechanism for the temperature- and gibberellin-dependent control of seed germination

Graeber, K., Linkies, A., Steinbrecher, T., Mummenhoff, K., Tarkowska, D., Tureckova, V., Ignatz, M., Sperber, K., Voegele, A., de Jong, H., Urbanova, T., Strnad, M. & Leubner-Metzger, G. 26 Aug 2014 In : Proceedings of the National Academy of Sciences of the United States of America. 111, 34, p. E3571-E3580 10 p.

Research output: Contribution to journal › Article

Balancing act: matching growth with environment by the TOR signalling pathway

Henriques, R., Bogre, L., Horvath, B. & Magyar, Z. Jun 2014 In : Journal of Experimental Botany. 65, 10, p. 2691-2701 11 p.

Research output: Contribution to journal › Literature review

The heat shock factor A4A confers salt tolerance and is regulated by oxidative stress and the mitogen-activated protein kinases MPK3 and MPK6.

Perez-Salamo, I., Papdi, C., Rigo, G., Zsigmond, L., Vilela, B., Lumbreras, V., Nagy, I., Horvath, B., Domoki, M., Darula, Z., Medzihradszky, K., Bogre, L., Koncz, C. & Szabados, L. May 2014 In : Plant Physiology. 165, p. 319-34

Research output: Contribution to journal › Article

Transcript and Metabolite Profiling for the Evaluation of Tobacco Tree and Poplar as Feedstock for the Bio-based Industry

Ruprecht, C. , Tohge, T. , Fernie, A. , Mortimer, C. L. , Kozlo, A. , Fraser, P. D. , Funke, N. , Cesarino, I. , Vanholme, R. , Boerjan, W. , Morreel, K. , Burgert, I. , Gierlinger, N. , Bulone, V. , Schneider, V. , Stockero, A. , Navarro, J. P. , Pudel, F. , Tambuyser, B. , Hygate, J. & 3 others Bumstead, J., Notley, L. & Persson, S. May 2014 In : Journal of Visualized Experiments. 87, 7 p., 51393

Research output: Contribution to journal › Article

Degradation of LIM domain-binding protein three during processing of Spanish dry-cured ham

Gallego, M., Mora, L., Fraser, P. D., Aristoy, M-C. & Toldra, F. 15 Apr 2014 In : Food Chemistry. 149, p. 121-128 8 p.

Research output: Contribution to journal › Article

Natural products - learning chemistry from plants

Staniek, A., Bouwmeester, H., Fraser, P. D., Kayser, O., Martens, S., Tissier, A., van der Krol, S., Wessjohann, L. & Warzecha, H. Mar 2014 In : Plant biotechnology journal. 9, 3, p. 326-336 11 p.

Research output: Contribution to journal › Literature review

Proteomic identification of antioxidant peptides from 400 to 2500 Da generated in Spanish dry-cured ham contained in a size-exclusion chromatography fraction

Mora, L., Escudero, E., Fraser, P. D., Aristoy, M-C. & Toldra, F. Feb 2014 In : Food research international. 56, p. 68-76 9 p.

Research output: Contribution to journal › Article

The optimisation and application of a metabolite profiling procedure for the metabolic phenotyping of Bacillus species

Perez-Fons, L., Bramley, P. M. & Fraser, P. D. Feb 2014 In : Metabolomics. 10, 1, p. 77-90 14 p.

Research output: Contribution to journal › Article

A genome-wide metabolomic resource for tomato fruit from Solanum pennellii

Perez-Fons, L., Wells, T., Corol, D. I., Ward, J. L., Gerrish, C., Beale, M. H., Seymour, G. B., Bramley, P. M. & Fraser, P. D. 2014 In : Scientific reports. 4, p. 3859

Research output: Contribution to journal › Article

Biogenesis and homeostasis of chloroplasts and other plastids

Jarvis, P. & López-Juez, E. Dec 2013 In : Nature reviews. Molecular cell biology. 14, 12, p. 787-802 16 p.

Research output: Contribution to journal › Article

The sub-cellular localisation of the potato (Solanum tuberosum L.) carotenoid biosynthetic enzymes, CrtRb2 and PSY2

Pasare, S., Wright, K., Campbell, R., Morris, W., Ducreux, L., Chapman, S., Bramley, P., Fraser, P., Roberts, A. & Taylor, M. Dec 2013 In : Protoplasma. 250, 6, p. 1381-1392 12 p.

Research output: Contribution to journal › Article

Functional characterization of long-chain prenyl diphosphate synthases from tomato

Jones, M. O., Perez-Fons, L., Robertson, F. P., Bramley, P. M. & Fraser, P. D. 5 Nov 2013 In : Biochemical Journal. 449, 3, p. 729-740 12 p.

Research output: Contribution to journal › Article

Proteolysis follow-up in dry-cured meat products through proteomic approaches

Mora, L., Fraser, P. D. & Toldra, F. Nov 2013 In : Food research international. 54, 1, p. 1292-1297 6 p.

Research output: Contribution to journal › Literature review

Natural products - modifying metabolite pathways in plants

Staniek, A., Bouwmeester, H., Fraser, P. D., Kayser, O., Martens, S., Tissier, A., van der Krol, S., Wessjohann, L. & Warzecha, H. Oct 2013 In : Plant biotechnology journal. 8, 10, p. 1159-1171 13 p.

Research output: Contribution to journal › Literature review

Transcriptional dynamics of two seed compartments with opposing roles in Arabidopsis seed germination

Dekkers, B. J. W., Pearce, S., van Bolderen-Veldkamp, R. P. . M., Marshall, A., Widera, P., Gilbert, J., Drost, H-G., Bassel, G. W., Müller, K., King, J. R., Wood, A. T. A., Quint, M., Krasnogor, N., Leubner-Metzger, G., Holdsworth, M. & Bentsink, L. 13 Jul 2013 In : Plant Physiology. 163, p. 205-215

Research output: Contribution to journal › Article

Carotenoids and tocopherols in yellow and red raspberries

Carvalho, E., Fraser, P. D. & Martens, S. 1 Jul 2013 In : Food Chemistry. 139, 1-4, p. 744-752 9 p.

Research output: Contribution to journal › Article

Identification of novel antioxidant peptides generated in Spanish dry-cured ham

Escudero, E., Mora, L., Fraser, P. D., Aristoy, M-C. & Toldra, F. 15 May 2013 In : Food Chemistry. 138, 2-3, p. 1282-1288 7 p.

Research output: Contribution to journal › Article

NITRILASE1 regulates the exit from proliferation, genome stability and plant development

Doskočilová, A., Kohoutová, L., Volc, J., Kourová, H., Benada, O., Chumová, J., Plíhal, O., Petrovská, B., Halada, P., Bogre, L. & Binarová, P. May 2013 In : New Phytologist. 198, 3, p. 685-698

Research output: Contribution to journal › Article

The development and optimisation of a label-free quantitative proteomic procedure and its application in the assessment of genetically modified tomato fruit

Mora, L., Bramley, P. M. & Fraser, P. D. 25 Apr 2013 In : Proteomics. 13, 12-13, p. 2016-2030 15 p.

Research output: Contribution to journal › Article

Jasmonate controls leaf growth by repressing cell proliferation and the onset of endoreduplication while maintaining a potential stand-by mode

Noir, S., Bömer, M., Takahashi, N., Ishida, T., Tsui, T-L., Balbi, V., Shanahan, H., Sugimoto, K. & Devoto, A. Apr 2013 In : Plant Physiology. 161, 4, p. 1930-1951

Research output: Contribution to journal › Article

The role of the potato (Solanum tuberosum) CCD8 gene in stolon and tuber development

Pasare, S. A., Ducreux, L. J. M., Morris, W. L., Campbell, R., Sharma, S. K., Roumeliotis, E., Kohlen, W., van der Krol, S., Bramley, P. M., Roberts, A. G., Fraser, P. D. & Taylor, M. A. 15 Mar 2013 In : New Phytologist. 198, 4, p. 1108-1120 12 p.

Research output: Contribution to journal › Article

Network Inference Analysis Identifies an APRR2-Like Gene Linked to Pigment Accumulation in Tomato and Pepper Fruits

Pan, Y., Bradley, G., Pyke, K., Ball, G., Lu, C., Fray, R., Marshall, A., Jayasuta, S., Baxter, C., van Wijk, R., Boyden, L., Cade, R., Chapman, N. H., Fraser, P. D., Hodgman, C. & Seymour, G. B. Mar 2013 In : Plant physiology. 161, 3, p. 1476-1485 10 p.

Research output: Contribution to journal › Article

Purification and Identification of antihypertensive peptides in Spanish dry-cured ham

Escudero, E., Mora, L., Fraser, P. D., Aristoy, M-C., Arihara, K. & Toldra, F. 14 Jan 2013 In : Journal of proteomics. 78, p. 499-507 9 p.

Research output: Contribution to journal › Article

A DECADE OF PLANT PROTEOMICS AND MASS SPECTROMETRY: TRANSLATION OF TECHNICAL ADVANCEMENTS TO FOOD SECURITY AND SAFETY ISSUES

Ganesh Kumar Agrawal1*, Abhijit Sarkar1,2, Pier Giorgio Righetti3, Romina Pedreschi4, Sebastien Carpentier5, Tai Wang6, Bronwyn J. Barkla7, Ajay Kohli8, Bongani Kaiser Ndimba9, Natalia Bykova10, Christof Rampitsch11, Lello Zolla12, Mohamed Suhail Rafudeen13, Rainer Cramer14, Laurence Veronique Bindschedler14, Nikolaos Tsakirpaloglou8, Roya Janeen Ndimba15, Jill M. Farrant13, Jenny Renaut16, Dominique Job17, Shoshi Kikuchi18, and Randeep Rakwal1,19,20 2013 In : Mass spectrometry reviews.

Research output: Contribution to journal › Literature review

Host-Induced Gene Silencing in barley powdery mildew reveals a class of ribonuclease-like effectors

Clara Pliego, Daniela Nowara, Giulia Bonciani, Dana M. Gheorghe, Ruo Xu, Priyanka Surana, Ehren Whigham, Dan Nettleton, Adam J. Bogdanove, Roger P. Wise, Patrick Schweizer, Laurence V Bindschedler, Pietro D Spanu 2013 In : Molecular plant-Microbe interactions. 26, 6, p. 633-642

Research output: Contribution to journal › Article

Mysterious objects in the pleural biopsy of a patient with recurrent pleural empyema: Photo Quiz Answer: Tomato seeds in the pleural biopsy after emergency thoracotomy

Held, J., Graeber, K., Leubner-Metzger, G., Kunkel, T., Theilacker, C., Kramme, S. & Schmitt-Graeff, A. 2013 In : Journal of Clinical Microbiology. in press

Research output: Contribution to journal › Article

Plant Proteomics in Crop Improvement

Cramer, R., Bindschedler, L. & Agrawal, G. K. 2013 In : Proteomics. 13, p. 1771-1771 1 p.

Research output: Contribution to journal › Editorial

PROTEOMIC IDENTIFICATION OF SMALL ANTIOXIDANT PEPTIDES IN DRY-CURED HAM

Toldra, F., Mora, L., Escudero, E., Fraser, P. D. & Aristoy, M. C. 2013 In : Annals of nutrition and metabolism. 63, p. 1682-1682 1 p.

Research output: Contribution to journal › Meeting abstract

Spatiotemporal seed development analysis provides insight into primary dormancy induction and evolution of the Lepidium DELAY OF GERMINATION1 genes

Graeber, K., Voegele, A., Büttner-Mainik, A., Sperber, K., Mummenhoff, K. & Leubner-Metzger, G. 2013 In : Plant Physiology. 161, p. 1903-1917 15 p.

Research output: Contribution to journal › Article

Subchromoplast sequestration of carotenoids affects regulatory mechanisms in tomato lines expressing different carotenoid gene combinations

Nogueira, M., Mora, L., Enfissi, E. M. A., Bramley, P. M. & Fraser, P. D. 2013 In : Plant Cell. 25, 11, p. 4560-4579

Research output: Contribution to journal › Article

Transcriptome-wide mapping of pea seed ageing reveals a pivotal role for genes related to oxidative stress and programmed cell death

Chen, H., Osuna, D., Colville, L., Lorenzo, O., Graeber, K., Küster, H., Leubner-Metzger, G. & Kranner, I. 2013 In : PLoS One. 8, e78471

Research output: Contribution to journal › Article

Biosynthesis of a novel C-30 carotenoid in Bacillus firmus isolates

Steiger, S., Perez-Fons, L., Fraser, P. D. & Sandmann, G. Oct 2012 In : Journal of applied microbiology. 113, 4, p. 888-895 8 p.

Research output: Contribution to journal › Article

The biosynthetic pathway to a novel derivative of 4,4 '-diapolycopene-4,4 '-oate in a red strain of Sporosarcina aquimarina

Steiger, S., Perez-Fons, L., Fraser, P. D. & Sandmann, G. Sep 2012 In : Archives of microbiology. 194, 9, p. 779-784 6 p.

Research output: Contribution to journal › Article

The identification and rapid extraction of hydrocarbons from Nicotiana glauca: A potential advanced renewable biofuel source

Mortimer, C. L., Bramley, P. M. & Fraser, P. D. Sep 2012 In : Phytochemistry letters. 5, 3, p. 455-458 4 p.

Research output: Contribution to journal › Article

Computational selection of transcriptomics experiments improves Guilt-by-Association analyses

Bhat, P., Yang, H., Bogre, L., Devoto, A. & Paccanaro, A. 7 Aug 2012 In : PLoS One. 7, 8, e39681

Research output: Contribution to journal › Article