Plant Molecular Sciences

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  1. 2019
  2. Forthcoming

    The MKK7-MPK6 MAP Kinase Module is a Regulator of Meristem Quiescence or Active Growth in Arabidopsis

    Dóczi, R., Hatzimasoura, E., Farahi Bilooei, S., Ahmad, Z., Ditengou, F. A., Lopez Juez, E., Palme, K. & Bogre, L., 6 Feb 2019, (Accepted/In press) In : Frontiers in Plant Science.

    Research output: Contribution to journal › Article

  3. Published

    Dispersal biophysics and adaptive significance of dimorphic diaspores in the annual Aethionema arabicum (Brassicaceae)

    Arshad, W., Sperber, K., Steinbrecher, T., Nichols, B., Jansen, V. A. A., Leubner, G. & Mummenhoff, K., 30 Jan 2019, In : New Phytologist. 221, p. 1434-1446 13 p.

    Research output: Contribution to journal › Article

  4. Published

    Usability of reference-free transcriptome assemblies for detection of differential expression: a case study on Aethionema arabicum dimorphic seeds

    Wilhelmsson, P., Chandler, J., Fernandez-Pozo, N., Graeber, K., Ullrich, K., Arshad, W., Khan, S., Hofberger, J., Buchta, K., Edger, P., Pires, C., Schranz, M. E., Leubner, G. & Rensing, S., 30 Jan 2019, In : BMC Genomics. 20, p. 1-19 19 p., 95

    Research output: Contribution to journal › Article

  5. E-pub ahead of print

    The road to astaxanthin production in tomato fruit reveals plastid and metabolic adaptation resulting in an unintended high lycopene genotype with delayed over-ripening properties

    Enfissi, E., Nogueira, M. & Fraser, P., 8 Jan 2019, In : Plant biotechnology journal.

    Research output: Contribution to journal › Article

  6. Published

    Metabolic diversity in sweet potato (Ipomoea Batatas, Lam.) leaves and storage roots

    Drapal, M. & Fraser, P., 1 Jan 2019, In : Horticulture Research. 6, p. 1-9 9 p., 2

    Research output: Contribution to journal › Article

  7. 2018
  8. E-pub ahead of print

    Circadian leaf movements facilitate overtopping of neighbors

    Woodley Of Menie, M., Pawlik, P., Webb, M., Bruce, K. & Devlin, P., 28 Dec 2018, In : Progress in Biophysics and Molecular Biology. 32 p.

    Research output: Contribution to journal › Article

  9. E-pub ahead of print

    The construction of a fusion enzyme for astaxanthin formation and its characterisation in microbial and plant hosts: A new tool for engineering ketocarotenoids

    Nogueira, M., Enfissi, E. & Fraser, P., 20 Dec 2018, In : Metabolic engineering. 25 p.

    Research output: Contribution to journal › Article

  10. Forthcoming

    De novo transcriptome analysis of peduncle neckingin cut Rosa hybrida cultivar ‘H30’

    Lear, B., Marchbank, A., Kent, N., Tansey, K., Robert M. Andrews, Devlin, P., Rogers, H. J. & Stead, A., 18 Dec 2018, (Accepted/In press) In : Acta Horticulturae.

    Research output: Contribution to journal › Article

  11. Published

    Soil Inoculation with Bacillus spp. Modifies Root Endophytic Bacterial Diversity, Evenness, and Community Composition in a Context-Specific Manner

    Gadhave, K., Devlin, P., Ebertz, A., Ross, A. & Gange, A., Oct 2018, In : Microbial Ecology. 76, 3, p. 741-750 10 p.

    Research output: Contribution to journal › Article

  12. Published

    The assessment of changes to the nontuberculous mycobacteria metabolome in response to anti-TB drugs

    Fraser, P., Drapal, M. & Wheeler, P. R., 26 Jun 2018, In : FEMS Microbiology Letters.

    Research output: Contribution to journal › Article

  13. Published

    COI1-dependent jasmonate signalling affects growth, metabolites production and cell wall protein composition in arabidopsis

    Devoto, A., Bomer, M., O’Brien, J. A., Perez Salamo, I., Krasauskas, J., Finch, P., Briones Gomez, A., Daudi, A., Souda, P., Tsui, T., Whitelegge, J. P. & Bolwell, P., 19 Jun 2018, In : Annals of Botany. p. 1-13 13 p.

    Research output: Contribution to journal › Article

  14. E-pub ahead of print

    Carotenoid profiling of yams: Clarity, comparisons and diversity

    Fraser, P. & Price, E., 27 Mar 2018, In : Food Chemistry. 259, p. 130-138

    Research output: Contribution to journal › Article

  15. E-pub ahead of print

    Tissue and cellular mechanics of seeds

    Steinbrecher, T. & Leubner, G., 20 Mar 2018, In : Current Opinion in Genetics & Development. 51, p. 1-10

    Research output: Contribution to journal › Article

  16. E-pub ahead of print

    Detection and Enhancement of Ketocarotenoid Accumulation in the Newly Isolated Sarcinoid Green Microalga Chlorosarcinopsis PY02

    Cherdchukeattisak, P., Fraser, P., Purton, S. & Wannathong Brocklehurst, T., 12 Feb 2018, In : Open biology. 7, 1

    Research output: Contribution to journal › Article

  17. Published

    Extending our tools and resources in the non-conventional industrial yeast Xanthophyllomyces dendrorhous through the application of metabolite profiling methodologies.

    Alcalde Rodriguez, E. & Fraser, P., 12 Feb 2018, In : Metabolomics. 14, 3

    Research output: Contribution to journal › Article

  18. E-pub ahead of print

    Converging Light, Energy and Hormonal Signaling Control Meristem Activity, Leaf Initiation, and Growth

    Mohammed, B., Farahi Bilooei, S., Dóczi, R., Grove, E., Railo, S., Palme, K., Ditengou, F. A., Bogre, L. & Lopez Juez, E., 6 Feb 2018, In : Plant physiology. 176, 2, p. 1365-1381 17 p.

    Research output: Contribution to journal › Article

  19. Published

    Creating plant molecular factories for industrial and nutritional isoprenoid production

    Nogueira, M., Enfissi, E., Almeida Barros da Silva, J. & Fraser, P., 1 Feb 2018, In : Current Opinion in Biotechnology. 49, p. 80-87 8 p.

    Research output: Contribution to journal › Article

  20. Published

    Finite indentation of highly curved elastic shells

    Pearce, S., King, J., Steinbrecher, T., Leubner, G., Everitt, N. & Holdsworth, M., 24 Jan 2018, In : Proceedings of the Royal Society A: Mathematical, Physical & Engineering Sciences. 474, 20170482

    Research output: Contribution to journal › Article

  21. 2017
  22. E-pub ahead of print

    Co-evolving MAPK and PID Phosphosites Indicate an Ancient Environmental Control of PIN Auxin Transporters in Land Plants: Regulation of PIN by MAPK signalling

    Bogre, L., Dory, M., Hatzimasoura, E., Kállai, B. M., Nagy, S. K., Jäger, K., Darula, Z., Nádai, T. V., Mészáros, T., Lopez Juez, E., Barnabás, B., Palme, K., Ditengou, F. A. & Dóczi, R., 25 Dec 2017, In : FEBS Letters. FEBSL-17-0935.R2

    Research output: Contribution to journal › Letter

  23. Forthcoming

    What causes peduncle necking in cut Rosa hybrida? Transcriptome analysis of rose stem tissue and analysis of microbial load

    Lear, B., Marchbank, A., Kent, N., Tansey, K., Andrews, R., Wheeler, T., Crompton, R., Devlin, P., Rogers, H. J. & Stead, A., 15 Dec 2017, (Accepted/In press) In : Acta Horticulturae.

    Research output: Contribution to journal › Meeting abstract

  24. Published

    Fruit fracture biomechanics and the release of Lepidium didymum pericarp-imposed mechanical dormancy by fungi

    Sperber, K., Steinbrecher, T., Graeber, K., Scherer, G., Clausing, S., Wiegand, N., Hourston, J., Kurre, R., Leubner, G. & Mummenhoff, K., 30 Nov 2017, In : Nature Communications. 8, p. 1-11 11 p., 1868

    Research output: Contribution to journal › Article

  25. Published

    Engineering of tomato for the sustainable production of ketocarotenoids and its evaluation in aquaculture feed

    Nogueira, M., Enfissi, E., martinez, M., Driller, L., Schuch, W., Sandmann, G. & Fraser, P., 1 Oct 2017, In : Proceedings of the National Academy of Sciences of the United States of America. 114, 41, p. 10876–10881 6 p.

    Research output: Contribution to journal › Article

  26. Published

    Improving Crop Seed Quality and Seedling Performance

    Leubner, G., Sep 2017, In : IMPACT. 7, p. 81-83 4 p.

    Research output: Contribution to journal › Article

  27. Published

    Arabidopsis RETINOBLASTOMA RELATED directly regulates DNA damage responses through functions beyond cell cycle control

    Horvath, B., Kourova, H., Nagy, S., Nemeth, E., Magyar, Z., Papdi, C., Ahmad, Z., Sanchez-Perez, G. F., Perilli, S., Blilou, I., Pettkó-Szandtner, A., Darula, Z., Meszaros, T., Binarova, P., Bogre, L. & Scheres, B., 2 May 2017, In : EMBO Journal . 36, 9, p. 1261-1278 18 p.

    Research output: Contribution to journal › Article

  28. Published

    The Formation and Sequestration of Nonendogenous Ketocarotenoids in Transgenic Nicotiana glauca

    Mortimer, C., Bramley, P. & Fraser, P., 3 Mar 2017, In : Plant physiology. 173, 3, p. 1617-1635 19 p.

    Research output: Contribution to journal › Article

  29. Published

    Identification of metabolites associated with water stress responses in Solanum tuberosum L. clones

    Drapal, M. & Fraser, P., Mar 2017, In : Phytochemistry. 135, p. 24–33 10 p.

    Research output: Contribution to journal › Article

  30. Published

    The biomechanics of seed germination

    Steinbrecher, T. & Leubner, G., 1 Feb 2017, In : Journal of Experimental Botany. 68, 4, p. 765-783 19 p.

    Research output: Contribution to journal › Article

  31. Published

    The regulation of carotenoid formation in tomato fruit

    Enfissi, E., Nogueira, M., Bramley, P. & Fraser, P., Feb 2017, In : Plant Journal. 89, 4, p. 774–788 15 p.

    Research output: Contribution to journal › Article

  32. Published

    Towards the development of a sustainable soya bean-based feedstock for aquaculture

    Fraser, P., Feb 2017, In : Plant biotechnology journal. 15, 2, p. 227-236 10 p.

    Research output: Contribution to journal › Article

  33. Published

    Biomechanical properties of wheat grains: the implications on milling

    Hourston, J., Ignatz, M., Reith, M., Leubner, G. & Steinbrecher, T., 1 Jan 2017, In : Journal of the Royal Society. Interface. 14, 126, p. 1-12 12 p.

    Research output: Contribution to journal › Article

  34. Published

    Seed dormancy: Development of Dormancy

    Graeber, K., Nakabayashi, K. & Leubner-Metzger, G., 2017, Encyclopedia of Applied Plant Sciences. Thomas, B., Murray, B. & Murphy, D. (eds.). 2nd ed. Waltham, MA: Elsevier, Vol. 1, p. 483-489 8 p. 209

    Research output: Chapter in Book/Report/Conference proceeding › Entry for encyclopedia/dictionary

  35. Published

    Seed Dormancy: Genetics of Dormancy

    Nakabayashi, K., Graeber, K. & Leubner-Metzger, G., 2017, Encyclopedia of Applied Plant Sciences. Thomas, B., Murray, B. & Murphy, D. (eds.). 2nd ed. Waltham, MA: Elsevier, Vol. 1, p. 504-508 5 p. 210

    Research output: Chapter in Book/Report/Conference proceeding › Entry for encyclopedia/dictionary

  36. Unpublished

    The role of FHY3 and FAR1 in plant-microbial interaction in Arabidopsis thaliana

    Ebertz, A., 2017, (Unpublished) 228 p.

    Research output: Thesis › Doctoral Thesis

  37. 2016
  38. Published

    Antioxidant compounds and their bioaccessibility in tomato fruit and puree obtained from a DETIOLATED-1 (DET-1) down-regulated genetically modified genotype

    Talens, P., Mora, L., Bramley, P. & Fraser, P., 15 Dec 2016, In : Food Chemistry. 213, p. 735–741 7 p.

    Research output: Contribution to journal › Article

  39. Published

    DREAMs make plant cells to cycle or to become quiescent

    Magyar, Z., Bogre, L. & Ito, M., Dec 2016, In : Current Opinion in Plant Biology. 34, p. 100-106 7 p.

    Research output: Contribution to journal › Literature review

  40. Published

    Engineered maize as a source of astaxanthin: processing and application as fish feed

    Nogueira, M., Fraser, P. & SANDMANN, G., Dec 2016, In : Transgenic Research. 25, 6, p. 785–793 9 p.

    Research output: Contribution to journal › Article

  41. E-pub ahead of print

    Metabolite profiling of Phycomyces blakesleeanus carotene mutants reveals global changes across intermediary metabolism

    Alcalde Rodriguez, E. & Fraser, P., 23 Nov 2016, In : Microbiology. 162, p. 1963-1971 9 p.

    Research output: Contribution to journal › Article

  42. E-pub ahead of print

    Rapid identification of causal mutations in tomato EMS populations via mapping-by-sequencing

    Fraser, P., 3 Nov 2016, In : Nature Protocols. 11, p. 2401–2418 18 p.

    Research output: Contribution to journal › Article

  43. Published

    Developmental Control and Plasticity of Fruit and Seed Dimorphism in Aethionema arabicum

    Lenser, T. , Graeber, K. , Adigüzel, N. , Batur, Ö. S. , Dönmez, A. A. , Grosche, C. , Klettermann, M. , Mayland-Quellhorst, S. , Merai, Z. , Mohammadin, S. , Nguyen, T-P. , Rümpler, F. , Schulze, C. , Sperber, K. , Steinbrecher, T. , Wiegand, N. , Strnad, M. , Mittelsten Scheid, O. , Rensing, S. , Schranz, M. E. & 3 others Theißen, G., Mummenhoff, K. & Leubner-Metzger, G., Nov 2016, In : Plant physiology. 172, 3, p. 1691-1707 17 p.

    Research output: Contribution to journal › Article

  44. Published

    Genetic modification of tomato with the tobacco lycopene β-cyclase gene produces high β-carotene and lycopene fruit

    Louise, R., Schuch, W., Fraser, P. & Bramley, P., 1 Sep 2016, In : Zeitschrift für Naturforschung C. 71, 9-10, p. 295–301 7 p.

    Research output: Contribution to journal › Article

  45. E-pub ahead of print

    Metabolite analysis of Mycobacterium species under aerobic and hypoxic conditions reveals common metabolic traits

    Drapal, M., Wheeler, P. R. & Fraser, P., 1 Aug 2016, In : Microbiology. 162, 8, p. 1456-1467 12 p.

    Research output: Contribution to journal › Article

  46. Published

    Genetic improvement of tomato by targeted control of fruit softening

    Selman, U., Chapman, N. H., Rebecca, S., Poole, M., Gary, A., B Richard, G., M D Talbot, B., Judith, S., Susy, S., Perez-Fons, L., Fraser, P., A Gregory, T., Grierson, D. & Seymour, G., 25 Jul 2016, In : Nature biotechnology. 34, p. 950–952 3 p.

    Research output: Contribution to journal › Article

  47. Published

    Plants wait for the lights to change to red

    Devlin, P., 5 Jul 2016, In : Proceedings of the National Academy of Sciences of the United States of America. 113, 27, p. 7301-7303 3 p.

    Research output: Contribution to journal › Article

  48. Published

    Subchromoplast Fractionation Protocol for Different Solanaceae Fruit Species

    Nogueira, M., Berry, H., Nohl, R., Klompmaker, M., Holden, A. & Fraser, P., 5 Jul 2016, In : Bio-Protocol. 6, 13, p. 1-14 14 p., e1861

    Research output: Contribution to journal › Article

  49. Published

    Gibberellins and seed germination

    Urbanova, T. & Leubner-Metzger, G., May 2016, Annual Plant Reviews: The Gibberellins. Hedden, P. & Thomas, S. G. (eds.). Wiley-Blackwell, Vol. 49, p. 253-284 31 p. Chapter 9

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

  50. E-pub ahead of print

    DRACULA2 is a dynamic nucleoporin with a role in regulating the shade avoidance syndrome in Arabidopsis

    Gallemí, M., Galstyan, A., Paulišić, S., Then, C., Ferrández-Ayela, A., Lorenzo-Orts, L., Roig-Villanova, I., Wang, X., Micol, J. L., Ponce, M. R., Devlin, P. & Martinez-Garcia, J., 17 Mar 2016, In : Development (Cambridge, England). 143, p. 1623-1631 9 p.

    Research output: Contribution to journal › Article

  51. Published

    Interactions between the Powdery Mildew Effector BEC1054 and Barley Proteins Identify Candidate Host Targets

    Pennington, H. G., Gheorghe, D. M., Damerum, A., Pliego, C., Spanu, P. D., Cramer, R. & Bindschedler, L., 4 Mar 2016, In : Journal of Proteome Research. 15, 3, p. 826-839 14 p.

    Research output: Contribution to journal › Article

  52. Published

    Metabolic engineering of astaxanthin biosynthesis in maize endosperm and characterization of a prototype high oil hybrid

    Fraser, P., 1 Mar 2016, In : Transgenic Research. TRAG-D-15-00179R1, p. 1-13 13 p.

    Research output: Contribution to journal › Article

  53. Published

    FHY3 and FAR1 Act Downstream of Light Stable Phytochromes

    Siddiqui, H., Khan, S., Rhodes, B. & Devlin, P., 22 Feb 2016, In : Frontiers in Plant Science. 7, p. 1-10 10 p., 175

    Research output: Contribution to journal › Article

  54. Published

    Mildew-Omics: How Global Analyses Aid the Understanding of Life and Evolution of Powdery Mildews

    Bindschedler, L., Panstruga, R. & Spanu, P. D., 15 Feb 2016, In : Frontiers in Plant Science. 7, p. 1-11 11 p., 123

    Research output: Contribution to journal › Literature review

  55. Published

    Measurement issues associated with quantitative molecular biology analysis of complex food matrices for the detection of food fraud

    Burns, M., Wiseman, G., Knight, A., Bramley, P., Foster, L., Rollinson, S., Damant, A. & Primrose, S., 1 Jan 2016, In : The Analyst. 141, 1, p. 45-61 16 p.

    Research output: Contribution to journal › Article

  56. Published

    Product stability and sequestration mechanisms in Solanum tuberosum engineered to biosynthesize high value ketocarotenoids

    Mortimer, C., Misawa, N., Ducreux, L., Campbell, R., Bramley, P., Taylor, M. & Fraser, P., 1 Jan 2016, In : Plant biotechnology journal. 14, 1, p. 140-152 13 p.

    Research output: Contribution to journal › Article

  57. 2015
  58. Published

    Chloroplast biogenesis-associated nuclear genes: Control by plastid signals evolved prior to their regulation as part of photomorphogenesis.

    Hills, A. C., Khan, S. & Lopez Juez, E., 10 Dec 2015, In : Frontiers in Plant Science. 6, 1078

    Research output: Contribution to journal › Article

  59. E-pub ahead of print

    Chloroplast biology: Cost–benefit analysis

    Lopez Juez, E., 1 Dec 2015, In : Nature Plants. 1, 2015, p. 1-2 2 p., 15191

    Research output: Contribution to journal › Book/Film/Article review

  60. Published

    Evolution of the EKA family of powdery mildew avirulence-effector genes from the ORF 1 of a LINE retrotransposon

    Amselem, J., Vigouroux, M., Oberhaensli, S., Brown, J. K. M., Bindschedler, L., Skamnioti, P., Wicker, T., Spanu, P. D., Quesneville, H. & Sacristan, S., 10 Nov 2015, In : BMC Genomics. 16, 917, p. 1-14 14 p.

    Research output: Contribution to journal › Article

  61. E-pub ahead of print

    MYB3Rs, plant homologs of Myb oncoproteins, control cell cycle-regulated transcription and form DREAM-like complexes

    Kobayashi, K., Suzuki, T., Iwata, E., Magyar, Z., Bogre, L. & Ito, M., 9 Nov 2015, In : Transcription. 6, 5, p. 106-11 6 p.

    Research output: Contribution to journal › Article

  62. Published

    Low-temperature-specific effects of PHYTOCHROME C on the circadian clock in Arabidopsis suggest that PHYC underlies natural variation in biological timing

    Edwards, K., Guerineau, F., Devlin, P. & Millar, A., 5 Nov 2015, In : bioRxiv. 10.1101/030577

    Research output: Contribution to journal › Article

  63. Published

    Standards for plant synthetic biology: a common syntax for exchange of DNA parts

    Patron, N. , Orzaez, D. , Marillonnet, S. , Warzecha, H. , Matthewman, C. , Youles, M. , Raitskin, O. , Leveau, A. , Farre, G. , Rogers, C. , Smith, A. , Hibberd, J. , Webb, A. A. R. , Locke, J. , Schornack, S. , Ajioka, J. , Baulcombe, D. C. , Zipfel, C. , Kamoun, S. , Jones, J. D. G. & 38 others Kuhn, H., Robatzek, S., Van Esse, H. P., Sanders, D., Oldroyd, G., Martin, C., Field, R., O'Connor, S., Fox, S., Wulff, B., Miller, B., Breakspear, A., Radhakrishnan, G., Delaux, P-M., Loque, D., Granell, A., Tissier, A., Shih, P., Brutnell, T. P., Quick, W. P., Rischer, H., Fraser, P., Aharoni, A., Raines, C., South, P. F., Ane, J-M., Hamberger, B. R., Langdale, J., Stougaard, J., Bouwmeester, H., Udvardi, M., Murray, J. A. H., Ntoukakis, V., Schaefer, P., Denby, K., Edwards, K. J., Osbourn, A. & Haseloff, J., Oct 2015, In : New Phytologist. 208, 1, p. 13-19 7 p.

    Research output: Contribution to journal › Article

  64. Published

    Broadly Conserved Fungal Effector BEC1019 Suppresses Host Cell Death and Enhances Pathogen Virulence in Powdery Mildew of Barley (Hordeum vulgare L.)

    Whigham, E., Qi, S., Mistry, D., Surana, P., Xu, R., Fuerst, G., Pliego, C., Bindschedler, L., Spanu, P. D., Dickerson, J. A., Innes, R. W., Nettleton, D., Bogdanove, A. J. & Wise, R. P., 11 Sep 2015, In : Molecular plant-Microbe interactions. 28, 9, p. 968-983 16 p.

    Research output: Contribution to journal › Article

  65. E-pub ahead of print

    Transcriptional repression by MYB3R proteins regulates plant organ growth

    Kobayashi, K. , Suzuki, T. , Iwata, E. , Nakamichi, N. , Suzuki, T. , Chen, P. , Ohtani, M. , Ishida, T. , Hosoya, H. , Müller, S. , Leviczky, T. , Pettkó-Szandtner, A. , Darula, Z. , Iwamoto, A. , Nomoto, M. , Tada, Y. , Higashiyama, T. , Demura, T. , Doonan, J. H. , Hauser, M-T. & 5 others Sugimoto, K., Umeda, M., Magyar, Z., Bogre, L. & Ito, M., 11 Jun 2015, In : EMBO Journal . 34, 15, p. 1992-2007 16 p.

    Research output: Contribution to journal › Article

  66. E-pub ahead of print

    The Arabidopsis mitogen-activated protein kinase 6 is associated with γ-tubulin on microtubules, phosphorylates EB1c and maintains spindle orientation under nitrosative stress

    Kohoutová, L., Kourová, H., Nagy, S. K., Volc, J., Halada, P., Mészáros, T., Meskiene, I., Bogre, L. & Binarová, P., 9 Jun 2015, In : New Phytologist. 207, 4, p. 1061-74 14 p.

    Research output: Contribution to journal › Article

  67. Published

    The low oxygen, oxidative and osmotic stress responses synergistically act through the ethylene response factor VII genes RAP2.12, RAP2.2 and RAP2.3.

    Papdi, C., Perez-Salamo, I., Joseph, M. P., Giuntoli, B., Bogre, L., Koncz, C. & Szabados, L., 27 May 2015, In : Plant Journal. 82, 5, p. 772-784 13 p.

    Research output: Contribution to journal › Article

  68. Published

    Optimising ketocarotenoid production in potato tubers: Effect of genetic background, transgene combinations and environment

    Campbell, R., Morris, W. L., Mortimer, C. L., Misawa, N., Ducreux, L. J. M., Morris, J. A., Hedley, P. E., Fraser, P. D. & Taylor, M. A., 1 May 2015, In : Trends in Plant Science. 234, p. 27-37 11 p.

    Research output: Contribution to journal › Article

  69. Published

    Activation of AtMPK9 through autophosphorylation that makes it independent of the canonical MAPK cascades

    Nagy, S. K., Darula, Z., Kállai, B. M., Bogre, L., Bánhegyi, G., Medzihradszky, K. F., Horváth, G. V. & Mészáros, T., 1 Apr 2015, In : Biochemical journal. 467, 1, p. 167-175 9 p.

    Research output: Contribution to journal › Article

  70. Published

    Auxin involvement in tepal senescence and abscission in Lilium: a tale of two lilies

    Lombardi, L., Arrom, L., Mariotti, L., Battelli, R., Picciarelli, P., Kille, P., Stead, A., Munne-Bosch, S. & Rogers, H. J., 1 Feb 2015, In : Journal of Experimental Botany. 66, 3, p. 945-956 12 p.

    Research output: Contribution to journal › Article

  71. Published

    Metabolite profiling in LC-DAD using multivariate curve resolution: the alsace package for R

    Wehrens, R., Carvalho, E. & Fraser, P. D., 1 Feb 2015, In : Metabolomics. 11, 1, p. 143-154 12 p.

    Research output: Contribution to journal › Article

  72. Published

    Peptides naturally generated from ubiquitin-60S ribosomal protein as potential biomarkers of dry-cured ham processing time

    Mora, L., Gallego, M., Concepcion Aristoy, M., Fraser, P. D. & Toldra, F., 1 Feb 2015, In : Food control. 48, p. 102-107 6 p.

    Research output: Contribution to journal › Article

  73. Published

    Annotation and functional assignment of the genes for the C-30 carotenoid pathways from the genomes of two bacteria: Bacillus indicus and Bacillus firmus

    Steiger, S., Perez-Fons, L., Cutting, S. M., Fraser, P. D. & Sandmann, G., 1 Jan 2015, In : Microbiology (Reading, England). 161, 1, p. 194-202 9 p.

    Research output: Contribution to journal › Article

  74. Published

    Promotion of Testa Rupture during Garden Cress Germination Involves Seed Compartment-Specific Expression and Activity of Pectin Methylesterases

    Scheler, C., Weitbrecht, K., Pearce, S., Hampstead, A., Büttner-Mainik, A., Lee, K. JD., Voegele, A., Oracz, K., Dekkers, B. JW., Wang, X., Wood, A., Bentsink, L., King, J. R., Knox, P., Holdsworth, M., Müller, K. & Leubner-Metzger, G., Jan 2015, In : Plant physiology. 167, 1, p. 200-215 16 p.

    Research output: Contribution to journal › Article

  75. 2014
  76. Published

    The application of metabolite profiling to Mycobacterium spp. Determination of metabolite changes associated with growth

    Drapal, M., Perez-Fons, L., Wheeler, P. R. & Fraser, P. D., Nov 2014, In : Journal of microbiological methods. 106, p. 23-32 10 p.

    Research output: Contribution to journal › Article

  77. Published

    Methyl 5-glucosyl-5,6-dihydro-apo-4,4 '-lycopenoate, a novel antioxidative glyco-C-30-carotenoic acid produced by a marine bacterium Planococcus maritimus (vol 61, pg 729, 2008)

    Shindo, K., Endo, M., Miyake, Y., Wakasugi, K., Morritt, D., Bramley, P. M., Fraser, P. D., Kasai, H. & Misawa, N., Oct 2014, In : Journal of Antibiotics. 67, 10, p. 731-732 2 p.

    Research output: Contribution to journal › Article

  78. Published

    DELAY OF GERMINATION 1 mediates a conserved coat-dormancy mechanism for the temperature- and gibberellin-dependent control of seed germination

    Graeber, K., Linkies, A., Steinbrecher, T., Mummenhoff, K., Tarkowska, D., Tureckova, V., Ignatz, M., Sperber, K., Voegele, A., de Jong, H., Urbanova, T., Strnad, M. & Leubner-Metzger, G., 26 Aug 2014, In : Proceedings of the National Academy of Sciences of the United States of America. 111, 34, p. E3571-E3580 10 p.

    Research output: Contribution to journal › Article

  79. Published

    Balancing act: matching growth with environment by the TOR signalling pathway

    Henriques, R., Bogre, L., Horvath, B. & Magyar, Z., Jun 2014, In : Journal of Experimental Botany. 65, 10, p. 2691-2701 11 p.

    Research output: Contribution to journal › Literature review

  80. Published

    The heat shock factor A4A confers salt tolerance and is regulated by oxidative stress and the mitogen-activated protein kinases MPK3 and MPK6.

    Perez-Salamo, I., Papdi, C., Rigo, G., Zsigmond, L., Vilela, B., Lumbreras, V., Nagy, I., Horvath, B., Domoki, M., Darula, Z., Medzihradszky, K., Bogre, L., Koncz, C. & Szabados, L., May 2014, In : Plant physiology. 165, p. 319-34

    Research output: Contribution to journal › Article

  81. Published

    Transcript and Metabolite Profiling for the Evaluation of Tobacco Tree and Poplar as Feedstock for the Bio-based Industry

    Ruprecht, C. , Tohge, T. , Fernie, A. , Mortimer, C. L. , Kozlo, A. , Fraser, P. D. , Funke, N. , Cesarino, I. , Vanholme, R. , Boerjan, W. , Morreel, K. , Burgert, I. , Gierlinger, N. , Bulone, V. , Schneider, V. , Stockero, A. , Navarro, J. P. , Pudel, F. , Tambuyser, B. , Hygate, J. & 3 others Bumstead, J., Notley, L. & Persson, S., May 2014, In : Journal of Visualized Experiments. 87, 7 p., 51393

    Research output: Contribution to journal › Article

  82. Published

    Degradation of LIM domain-binding protein three during processing of Spanish dry-cured ham

    Gallego, M., Mora, L., Fraser, P. D., Aristoy, M-C. & Toldra, F., 15 Apr 2014, In : Food Chemistry. 149, p. 121-128 8 p.

    Research output: Contribution to journal › Article

  83. Published

    Natural products - learning chemistry from plants

    Staniek, A., Bouwmeester, H., Fraser, P. D., Kayser, O., Martens, S., Tissier, A., van der Krol, S., Wessjohann, L. & Warzecha, H., Mar 2014, In : Plant biotechnology journal. 9, 3, p. 326-336 11 p.

    Research output: Contribution to journal › Literature review

  84. Published

    Proteomic identification of antioxidant peptides from 400 to 2500 Da generated in Spanish dry-cured ham contained in a size-exclusion chromatography fraction

    Mora, L., Escudero, E., Fraser, P. D., Aristoy, M-C. & Toldra, F., Feb 2014, In : Food research international. 56, p. 68-76 9 p.

    Research output: Contribution to journal › Article

  85. Published

    The optimisation and application of a metabolite profiling procedure for the metabolic phenotyping of Bacillus species

    Perez-Fons, L., Bramley, P. M. & Fraser, P. D., Feb 2014, In : Metabolomics. 10, 1, p. 77-90 14 p.

    Research output: Contribution to journal › Article

  86. Published

    A genome-wide metabolomic resource for tomato fruit from Solanum pennellii

    Perez-Fons, L., Wells, T., Corol, D. I., Ward, J. L., Gerrish, C., Beale, M. H., Seymour, G. B., Bramley, P. M. & Fraser, P. D., 2014, In : Scientific Reports. 4, p. 3859

    Research output: Contribution to journal › Article

  87. 2013
  88. Published

    Biogenesis and homeostasis of chloroplasts and other plastids

    Jarvis, P. & López-Juez, E., Dec 2013, In : Nature reviews. Molecular cell biology. 14, 12, p. 787-802 16 p.

    Research output: Contribution to journal › Article

  89. Published

    The sub-cellular localisation of the potato (Solanum tuberosum L.) carotenoid biosynthetic enzymes, CrtRb2 and PSY2

    Pasare, S., Wright, K., Campbell, R., Morris, W., Ducreux, L., Chapman, S., Bramley, P., Fraser, P., Roberts, A. & Taylor, M., Dec 2013, In : Protoplasma. 250, 6, p. 1381-1392 12 p.

    Research output: Contribution to journal › Article

  90. Published

    Functional characterization of long-chain prenyl diphosphate synthases from tomato

    Jones, M. O., Perez-Fons, L., Robertson, F. P., Bramley, P. M. & Fraser, P. D., 5 Nov 2013, In : Biochemical journal. 449, 3, p. 729-740 12 p.

    Research output: Contribution to journal › Article

  91. Published

    Proteolysis follow-up in dry-cured meat products through proteomic approaches

    Mora, L., Fraser, P. D. & Toldra, F., Nov 2013, In : Food research international. 54, 1, p. 1292-1297 6 p.

    Research output: Contribution to journal › Literature review

  92. Published

    Natural products - modifying metabolite pathways in plants

    Staniek, A., Bouwmeester, H., Fraser, P. D., Kayser, O., Martens, S., Tissier, A., van der Krol, S., Wessjohann, L. & Warzecha, H., Oct 2013, In : Plant biotechnology journal. 8, 10, p. 1159-1171 13 p.

    Research output: Contribution to journal › Literature review

  93. Published

    A decade of plant proteomics and mass spectrometry: Translation of technical advancements to food security and safety issues

    Agrawal, G. K. , Sarkar, A. , Righetti, P. G. , Pedreschi, R. , Carpentier, S. , Wang, T. , Barkla, B. J. , Kohli, A. , Kaiser Ndimba, B. , Bykova, N. V. , Rampitsch, C. , Zolla, L. , Suhail Rafudeen, M. , Cramer, R. , Bindschedler, L. , Tsakirpaloglou, N. , Janeen Ndimba, R. , Farrant, J. M. , Renaut, J. , Job, D. & 2 others Kikuchi, S. & Rakwal, R., 23 Aug 2013, In : Mass spectrometry reviews. 32, 5, p. 335-365 31 p.

    Research output: Contribution to journal › Literature review

  94. Published

    Transcriptional dynamics of two seed compartments with opposing roles in Arabidopsis seed germination

    Dekkers, B. JW., Pearce, S., van Bolderen-Veldkamp, R. P. M., Marshall, A., Widera, P., Gilbert, J., Drost, H-G., Bassel, G. W., Müller, K., King, J. R., Wood, A. T. A., Quint, M., Krasnogor, N., Leubner-Metzger, G., Holdsworth, M. & Bentsink, L., 13 Jul 2013, In : Plant physiology. 163, p. 205-215

    Research output: Contribution to journal › Article

  95. Published

    Carotenoids and tocopherols in yellow and red raspberries

    Carvalho, E., Fraser, P. D. & Martens, S., 1 Jul 2013, In : Food Chemistry. 139, 1-4, p. 744-752 9 p.

    Research output: Contribution to journal › Article

  96. Published

    Host-Induced Gene Silencing in Barley Powdery Mildew Reveals a Class of Ribonuclease-Like Effectors

    Pliego, C., Nowara, D., Bonciani, G., Gheorghe, D. M., Xu, R., Surana, P., Whigham, E., Nettleton, D., Bogdanove, A. J., Wise, R. P., Schweizer, P., Bindschedler, L. & Spanu, P. D., Jun 2013, In : Molecular plant-Microbe interactions. 26, 6, p. 633-642 10 p.

    Research output: Contribution to journal › Article

  97. Published

    Identification of novel antioxidant peptides generated in Spanish dry-cured ham

    Escudero, E., Mora, L., Fraser, P. D., Aristoy, M-C. & Toldra, F., 15 May 2013, In : Food Chemistry. 138, 2-3, p. 1282-1288 7 p.

    Research output: Contribution to journal › Article

  98. Published

    NITRILASE1 regulates the exit from proliferation, genome stability and plant development

    Doskočilová, A., Kohoutová, L., Volc, J., Kourová, H., Benada, O., Chumová, J., Plíhal, O., Petrovská, B., Halada, P., Bogre, L. & Binarová, P., May 2013, In : New Phytologist. 198, 3, p. 685-698

    Research output: Contribution to journal › Article

  99. Published

    The development and optimisation of a label-free quantitative proteomic procedure and its application in the assessment of genetically modified tomato fruit

    Mora, L., Bramley, P. M. & Fraser, P. D., 25 Apr 2013, In : Proteomics. 13, 12-13, p. 2016-2030 15 p.

    Research output: Contribution to journal › Article

  100. Published

    Carotenoid Biosynthesis and Chlorophyll Degradation

    Bramley, P., 5 Apr 2013, The Molecular Biology and Biochemistry of Fruit Ripening. Seymour, G., Poole, M., Giovannoni, J. & Tucker, G. (eds.). 1st ed. John Wiley & Sons, p. 75-116 41 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

  101. Published

    Jasmonate controls leaf growth by repressing cell proliferation and the onset of endoreduplication while maintaining a potential stand-by mode

    Noir, S., Bömer, M., Takahashi, N., Ishida, T., Tsui, T-L., Balbi, V., Shanahan, H., Sugimoto, K. & Devoto, A., Apr 2013, In : Plant physiology. 161, 4, p. 1930-1951

    Research output: Contribution to journal › Article

  102. Published

    The role of the potato (Solanum tuberosum) CCD8 gene in stolon and tuber development

    Pasare, S. A., Ducreux, L. J. M., Morris, W. L., Campbell, R., Sharma, S. K., Roumeliotis, E., Kohlen, W., van der Krol, S., Bramley, P. M., Roberts, A. G., Fraser, P. D. & Taylor, M. A., 15 Mar 2013, In : New Phytologist. 198, 4, p. 1108-1120 12 p.

    Research output: Contribution to journal › Article

  103. Published

    Network Inference Analysis Identifies an APRR2-Like Gene Linked to Pigment Accumulation in Tomato and Pepper Fruits

    Pan, Y., Bradley, G., Pyke, K., Ball, G., Lu, C., Fray, R., Marshall, A., Jayasuta, S., Baxter, C., van Wijk, R., Boyden, L., Cade, R., Chapman, N. H., Fraser, P. D., Hodgman, C. & Seymour, G. B., Mar 2013, In : Plant physiology. 161, 3, p. 1476-1485 10 p.

    Research output: Contribution to journal › Article

  104. Published

    Purification and Identification of antihypertensive peptides in Spanish dry-cured ham

    Escudero, E., Mora, L., Fraser, P. D., Aristoy, M-C., Arihara, K. & Toldra, F., 14 Jan 2013, In : Journal of proteomics. 78, p. 499-507 9 p.

    Research output: Contribution to journal › Article

  105. Published

    Fruits and vegetables

    Bramley, P., 2013, Proteomics in Foods: Principles and applications. Toldra, F. & Nollet, L. (eds.). 1st ed. New York: Springer, p. 323-340 17 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

  106. Forthcoming

    Mysterious objects in the pleural biopsy of a patient with recurrent pleural empyema: Photo Quiz Answer: Tomato seeds in the pleural biopsy after emergency thoracotomy

    Held, J., Graeber, K., Leubner-Metzger, G., Kunkel, T., Theilacker, C., Kramme, S. & Schmitt-Graeff, A., 2013, (Accepted/In press) In : Journal of Clinical Microbiology. in press

    Research output: Contribution to journal › Article

  107. Published

    Plant Proteomics in Crop Improvement

    Cramer, R., Bindschedler, L. & Agrawal, G. K., 2013, In : Proteomics. 13, p. 1771-1771 1 p.

    Research output: Contribution to journal › Editorial

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