1. 2020
  2. Published

    An evolutionary model that satisfies detailed balance

    Lember, J. & Watkins, C., 9 Nov 2020, In: Methodology and Computing in Applied Probability. 37 p.

    Research output: Contribution to journalArticlepeer-review

  3. E-pub ahead of print

    Fostering global data sharing: highlighting the recommendations of the Research Data Alliance COVID-19 working group

    Research Data Alliance & Shanahan, H., 9 Nov 2020, In: Wellcome Open Research. 267.

    Research output: Contribution to journalArticlepeer-review

  4. Published

    Feeder-Level Deep Learning-based Photovoltaic Penetration Estimation Scheme

    Zhang, X., Kuenzel, S. & Watkins, C., 13 Oct 2020.

    Research output: Contribution to conferencePaperpeer-review

  5. Published

    Predicting the Frequencies of Drug Side effects

    Galeano, D., Li, S., Gerstein, M. & Paccanaro, A., 11 Sep 2020, In: Nature Communications. 11, p. 1-14 14 p., 4575.

    Research output: Contribution to journalArticlepeer-review

  6. E-pub ahead of print

    Epidemic contact tracing with smartphone sensors

    Nguyen, D. K. A., Luo, Z. & Watkins, C., 1 Sep 2020, In: Journal of Location Based Services. 37 p.

    Research output: Contribution to journalArticlepeer-review

  7. Published

    What is semantic diversity and why does it facilitate visual word recognition?

    Cevoli, B., Watkins, C. & Rastle, K., 14 Jul 2020, In: Behavior Research Methods. p. 1-17 17 p.

    Research output: Contribution to journalArticlepeer-review

  8. Published

    Transatlantic Perspectives on the Use of Data Science in Museums and Heritage

    Platts, H., Howard, D., Dalton, P. & Watkins, C., Jul 2020, UK Research and Innovation.

    Research output: Chapter in Book/Report/Conference proceedingOther contribution

  9. Published

    RDA COVID-19 Recommendations and Guidelines on Data Sharing

    Research Data Alliance COVID-19 Working Group, 30 Jun 2020, 144 p.

    Research output: Book/ReportBook

  10. Published

    Privacy-Functionality Trade-off: A Privacy-Preserving Multi-Channel Smart Metering System

    Zhang, X., Kuenzel, S., Córdoba-Pachón, J-R. & Watkins, C., 21 Jun 2020, In: Energies. 13, 12, p. 1-30 30 p., 3221.

    Research output: Contribution to journalArticlepeer-review

  11. Published

    The Corrected Gene Proximity map for analyzing the 3D genome organization using Hi-C data

    Ye, C., Paccanaro, A., Gerstein, M. & Yan, K-K., 29 May 2020, In: BMC Bioinformatics. 21, p. 1-18 18 p., 222.

    Research output: Contribution to journalArticlepeer-review

  12. Published

    Anomaly Detection in Video Games

    Wilkins, B., Watkins, C. & Stathis, K., 20 May 2020, In: ArXiv.org. p. 1-4 4 p., 2005.10211.

    Research output: Contribution to journalArticle

  13. Published

    Network modeling of patients’ biomolecular profiles for clinical phenotype/outcome prediction

    Gliozzo, J., Perlasca, P., Mesiti, M., Casiraghi, E., Vallacchi, V., Vergani, E., Frasca, M., Grossi, G., Petrini, A., Re, M., Paccanaro, A. & Valentini, G., 27 Feb 2020, In: Scientific Reports. 10, p. 1-15 15 p., 3612.

    Research output: Contribution to journalArticlepeer-review

  14. Published

    Structuring Time Series Data to Gain Insight into Agent Behaviour

    Al-Baghdadi, N., Wisniewski, W., Lindsay, D., Lindsay, S., Kalnishkan, Y. & Watkins, C., 24 Feb 2020, Proceedings of the 3rd International Workshop on Big Data for Financial News and Data. IEEE, p. 5480-5490 11 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  15. E-pub ahead of print

    Helping the Consumers and Producers of Standards, Repositories and Policies to Enable FAIR Data

    McQuilton, P., Batista, D., Beyan, O., Granell, R., Coles, S., Izzo, M., Lister, A. L., Pergl, R., Rocca-Serra, P., Schaap, B., Shanahan, H., Thurston, M. & Sansone, S-A., 31 Jan 2020, In: Data Intelligence. 2, 1-2, p. 151-157 7 p.

    Research output: Contribution to journalArticlepeer-review

  16. 2019
  17. Published

    The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens

    Bhat, P., Torres Bobadilla, M., Paccanaro, A., Yang, H. & Romero, A. E., 19 Nov 2019, In: Genome Biology. 20, p. 1-23 23 p., 244 (2019).

    Research output: Contribution to journalArticlepeer-review

  18. Published

    Location Tracking Using Smartphone Accelerometer and Magnetometer Traces

    Nguyen, D. K. A., Akram, R. N., Markantonakis, K., Luo, Z. & Watkins, C., 26 Aug 2019, The First Location Privacy Workshop (LPW 2019), the 14th International Conference on Availability, Reliability and Security (ARES 2019). Association for Computing Machinery (ACM), p. 1-9 9 p. 96

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  19. E-pub ahead of print

    Explaining Deep Learning Models with Constrained Adversarial Examples

    Moore, J., Hammerla, N. & Watkins, C., 23 Aug 2019, Pacific Rim International Conference on Artificial Intelligence. Springer, p. 43-56 14 p. (Lecture Notes in Computer Science; vol. 11670).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  20. Published

    Disease gene prediction for molecularly uncharacterized diseases

    Caceres, J. & Paccanaro, A., 5 Jul 2019, In: PLoS Computational Biology. 15, 7, p. 1-14 14 p., e1007078.

    Research output: Contribution to journalArticlepeer-review

  21. Submitted

    Teaching FAIR

    Shanahan, H., 4 May 2019, (Submitted) In: Data Intelligence.

    Research output: Contribution to journalArticlepeer-review

  22. Submitted

    9 Simple recommendations for teaching data skills

    Shanahan, H., 16 Apr 2019, (Submitted) In: Data Science Journal.

    Research output: Contribution to journalArticlepeer-review

  23. Submitted

    Embedding Open Science practice into Data Science Training

    Shanahan, H., 1 Jan 2019, (Submitted).

    Research output: Contribution to conferencePosterpeer-review

  24. Forthcoming

    Learning interpretable disease self-representations for drug repositioning

    Galeano Galeano, D., Frasca, F., Gonzalez, G., Lapanogov, I., Veselkov, K., Paccanaro, A. & Bronstein, M. M., 2019, (Accepted/In press) Conference on Neural Information Processing Systems (NeurIPS) 2019: Graph representation Learning Workshop .

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  25. 2018
  26. Published

    Transcriptomics: Quantifying Non-Uniform Read Distribution Using MapReduce

    Alnasir, J. & Shanahan, H., 27 Dec 2018, In: International Journal for the Foundations of Computer Science. 29, 8, 20 p.

    Research output: Contribution to journalArticlepeer-review

  27. Published

    The application of Hadoop in structural bioinformatics

    Alnasir, J. & Shanahan, H., 20 Nov 2018, In: Briefings in Bioinformatics. p. 1-10 10 p., bby106.

    Research output: Contribution to journalArticlepeer-review

  28. Published

    Systems Metagenomics

    Shanahan, H. & Radwan, G., 15 Jul 2018.

    Research output: Contribution to conferencePosterpeer-review

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